Salmonella enterica subsp. enterica serovar Enteritidis EC20090332: AU39_00480
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Entry
AU39_00480 CDS
T03760
Name
(GenBank) RNA polymerase-binding ATPase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
senv
Salmonella enterica subsp. enterica serovar Enteritidis EC20090332
Brite
KEGG Orthology (KO) [BR:
senv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
senv03021
]
AU39_00480
Transcription machinery [BR:
senv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
AU39_00480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
GT_PLOD
AAA_34
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AHP76848
LinkDB
All DBs
Position
complement(109571..112477)
Genome browser
AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAMDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT
ITSHEGWQLHIDEVKEENGLLVYVGTRLDTEETNVTLREVLLDSKLVFSKPQDRLFAGQI
DRMDRFALRYRARKFQSEQYRMPYSGLRGQRTNLIPHQLNIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYTEAQH
DAYNPFETEQLVICSLDFARRNKQRLEHLCDAEWDLLVVDEAHHLVWSTDAPSREYMAIE
QLAERVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQKNYRPVADAVAMLL
AGNKLSNDELNRLGDLIGEQDIEPLLQAANSDRDDAQAARDELVSMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTVKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPEQIYQEFEGD
TGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKATTALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRAIYDSAYASLINYLAAPEET
DGFDDLIKSCREQHEALKAQLEQGRDRLLEIHSNGGEKAQQLAQSIEEQDDDTNLIAFAM
NLFDIVGINQDDRGDNLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWE
HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELVYVVEAQAPKQLQLNRFLPPTP
VRMLLDKNGNNLAAQVEFETFNRQLSAVNRHTGSKLVNAVQQDVHAILQLGETQIEKSAR
ALIDNARREADEKLSGELSRLEALRAVNPNIRDDELAAIDSNRQQVLESLNQAGWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacagaaagcgagctgggacttgga
accgttgttgcgatggatgcgcgaaccgtcaccttacttttcccgtccacgggggaaaac
cgcctgtatgcgcgcagtgattctcccgtgacccgcgtcatgttcaaccctggcgatacg
attacaagccatgaaggctggcagctacatatcgatgaagtaaaagaagaaaatggcctg
cttgtttatgtcggcacccgcctggataccgaagagaccaatgtgacgttgcgcgaggtt
ctgctcgacagcaagttggttttcagtaagccccaggatcgtctgttcgccggtcaaatt
gatcgaatggatcggttcgcgctgcgctatcgcgcccgtaaatttcagagcgagcagtac
cggatgccgtacagcggcctgcgcggtcagcggaccaacctgatcccgcatcagcttaat
atcgctcatgatgtgggtcgtcgccacgcgccacgcgtactgctggcggatgaagtgggc
ttaggtaaaaccattgaagccgggatgattctgcatcaacagttattatccggcgcggcg
gaacgcgtattgatcattgttccggaaaccctgcaacaccagtggctggtagaaatgctg
cgccgtttcaacctgcgcttcgcgctgttcgatgacgaacgctataccgaagcgcagcac
gacgcgtataacccgtttgaaaccgaacaactggtgatctgctcgctggatttcgcccgc
cgtaataagcagcgtctggaacatttgtgcgacgccgagtgggatctgctggtggtcgac
gaagcgcatcatctggtgtggagtaccgatgcgccgagtcgtgaatatatggccatcgaa
cagttagctgaacgcgtgccgggcgtgctgctgctgaccgccacgccagaacagctgggg
atggaaagccatttcgcccgtctgcgcctgctcgatccgaaccgtttccacgatttcgaa
cagtttgtcgaagaacagaaaaactaccgtcctgtcgccgatgcggtggccatgctgctg
gcgggcaataaactcagcaacgacgaactgaacaggctgggcgatctgatcggcgaacag
gatattgaaccgctgttgcaggccgctaatagcgatcgcgacgacgcgcaggccgcccgt
gatgagctggtgtcgatgctgatggatcgccacggcaccagccgcgttctgttccgcaac
acccgtaacggcgtcaaggggttcccgaaacgtgaactgcatacggtaaaactgccgctg
ccgacccagtatcagaccgccattaaggtctccggcattatgggcgcgcgtaaaagcgcg
gaagatcgcgcccgcgatatgctctatccggaacaaatttatcaggagttcgaaggcgat
actggcacctggtggaacttcgacccacgcgttgagtggctaatgggctatctgaccagc
catcgttcgcaaaaagtgctggtgatctgcgccaaagcgaccaccgcgttacagctggag
caggtgctgcgcgaacgcgaaggcatccgcgccgccgtgttccatgagggcatgtcgatt
atcgaacgcgaccgcgccgccgcctggttcgccgaagaagataccggcgcgcaggtgctg
ttatgttccgaaatcggctccgaaggacgtaacttccagtttgccagcaatctggtgatg
ttcgacttgccgtttaacccggatctgctggaacagcgtattggtcgtctggatcgcatc
ggccaggcgcatgatatccagatccacgtcccgtacctggaaaaaaccgcccagtcggtg
ctggttcgctggtatcacgaagggctggacgcctttgagcacacctgtccaaccggccgc
gcgatttatgattcagcctacgccagtctgattaactatctggccgcgcctgaagaaacc
gacgggtttgacgatctgatcaaatcctgccgcgagcaacatgaagcgctaaaagcccag
ttagaacagggccgcgaccgcctgctggagatccactccaacggtggtgaaaaagcccaa
cagcttgcacaaagcattgaagaacaggacgacgacaccaacctgatcgcgttcgccatg
aacctgttcgatatcgtcggcattaaccaggacgatcgcggcgacaacctgatcgtgctg
acgccgtccgaccacatgttggtgccggatttccccggcctgccggaagacggctgtact
atcacgtttgaacgtgacgtagccctgtctcgcgaagatgcgcagtttattacctgggaa
catccgctcatccgtaacggactggatctgatcctctccggcgataccggcagcagcacc
atttcgctgttgaaaaataaagcgctgccagtcggcacgctgctggtcgaactggtttac
gtcgtggaagcgcaggcgccgaaacagctacaactgaaccgcttcctgccgccgacgccg
gtacgtatgctgttagataaaaacggcaacaatctggccgcccaggtcgagtttgaaacc
ttcaaccgccagctcagcgccgtgaatcgccacaccggcagcaaactggtgaacgccgtg
caacaggacgtccacgccattttgcaactgggcgagacgcagattgaaaagtccgccaga
gcgctgattgataacgcgcgtcgcgaggcggatgaaaaactgtccggggaactgtcgcgt
ctggaagcgctgcgcgccgtcaacccgaacattcgcgacgacgaacttgccgctatcgac
agcaaccgtcagcaggtactggaaagcctgaatcaggcaggctggcgtctggacgcgctg
cgtcttatcgtcgtcacgcaccaataa
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