Sodalis endosymbiont of Henestaris halophilus: HBA_0018
Help
Entry
HBA_0018 CDS
T05311
Symbol
recD
Name
(GenBank) RecBCD enzyme subunit RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
seny
Sodalis endosymbiont of Henestaris halophilus
Pathway
seny03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
seny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HBA_0018 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seny03400
]
HBA_0018 (recD)
Enzymes [BR:
seny01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HBA_0018 (recD)
DNA repair and recombination proteins [BR:
seny03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HBA_0018 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
Viral_helicase1
UvrD_C_2
Helicase_RecD
AAA_11
SH3_13
UvrD-helicase
AAA_22
DEAD
SLFN-g3_helicase
FtsK_SpoIIIE
UvrD_C
PhoH
MukB
AAA_16
nSTAND3
Flavi_DEAD
CbiA
ResIII
SRP54
AAA
AAA_29
DUF4363
AAA_28
AAA_24
T2SSE
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
SNC58300
UniProt:
A0A2C8CYF4
LinkDB
All DBs
Position
I:37753..39600
Genome browser
AA seq
615 aa
AA seq
DB search
MEKILAEAQQLHLFRPLDVQFARMLATSADPTLMLASACLSANASSGHVCLPLERLMPAQ
LFNGRMPLLAQQAWLRAGRPSLEEWQKILLNSKAVSSGSHPTPLVLDKQRLYLQRMWRYE
CKVAQFFKRRPPPAEYNGTNIASVLTRYFPSDGTVINWQKIAAAVAITRPVALISGGPGT
GKTTTVAKMMAAFLQLNNNKRLRMIMAAPTGKAASRLSESLGLALKRLGLNEQQKQLLPL
EAITLHHLLGAQPNSQKMIYHQDNQLQVDILIIDEASMIDLTMMANLIAALPPQARVIFL
GDRFQLSSVEAGAVLSDICQFAESGYSSERRAELSRLTGFTLSEDDTGCCGYGVADSLCL
LRNNYRFDESSGINRLANIIHTGDYKGAIKLLKAGIERDINYKQLRDAEEYLRMLNDCID
GYKDYLQQVHKHDAPDKILESFNRFRLLCALREGPFGIAGLNERIKWALSNSGLIALDNT
AHWYAGRPVMILRNAPELDLYNGDIGIFLWDSQQTLRVHFSLPVGGVKTISLRRLPEHET
AFAMTVHKSQGSEFHHTALVLPNKILPVLTRELFYTAVTRARSRLSIYATEKVLQHIIKT
KTLRSSGLIERLATD
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaattcttgccgaagcgcaacagttacatttatttcgaccactggacgtccaa
ttcgcccgaatgctagctacatcagccgaccctacactaatgttggctagcgcctgcctt
agcgctaatgccagttcaggacatgtttgcctacccctagaacgattaatgcctgcgcaa
ctatttaacggccgtatgccgttactagcgcagcaggcttggttgcgggccggtagacct
tctcttgaagaatggcaaaagatactgctaaattccaaggcagttagctccggttcgcat
ccaacgccactagtactagataagcagagattatatttacaacgcatgtggcgctatgaa
tgcaaagtggcacagtttttcaaacgtcgaccgccacctgcagaatataacggaactaac
atcgcctcggtccttacacgttatttccctagcgacggcacagtaatcaattggcaaaaa
atcgcggcagcagtcgcgataacacgcccagtcgcactgatatctggaggtcctggcact
ggtaaaaccacaactgtagccaagatgatggctgcttttctgcagttgaacaacaacaaa
cgcttacgcatgattatggctgcccctacgggtaaagcagcatcgcgcctgagcgaatct
cttggcttggccttaaagcgactggggctaaatgaacaacagaaacaactgctgccgctt
gaggcaataacgctgcaccatttgctcggagcgcagcccaatagccaaaagatgatttat
catcaagacaatcagctacaagtagatattttgattattgatgaagcgtcaatgattgat
ttgacgatgatggctaatttgattgcagcgctaccgccgcaagcgcgagtgatatttttg
ggggatcgttttcagttatcctcggtggaggcaggagcagtattgagcgatatctgccag
ttcgcagagagtggatacagctccgagcgacgcgcggagctgtcgcgtctaacgggcttt
acgctatcggaagatgatacaggatgctgcggttatggagtcgccgatagtttatgcctg
ctccgtaataactaccgctttgatgaaagttccggtattaaccgactagcaaatattata
cacactggcgattacaagggtgcgataaagttgcttaaagccggcatcgagagggatatc
aactacaagcagttacgtgatgcagaggaatatctgcgtatgctaaacgactgcattgac
ggctataaagactatttgcagcaagtgcacaaacacgatgcaccggacaaaattcttgaa
tcctttaaccgattccgactgttgtgtgcgctgcgagaaggaccattcgggatcgctggc
cttaacgaacgtattaagtgggctttaagcaactcggggctgatcgctctcgataatacc
gcacactggtacgcagggcgtccggtaatgatattacgcaacgcaccggaactagatctg
tataacggtgatatcggtatctttctttgggacagtcaacagacgctacgcgtgcatttc
tccctaccagtaggtggtgttaaaactatatcgttgagacgattacctgagcatgaaacg
gcgttcgcgatgacggtacataaatctcagggatcggaattccatcacacagccttagtg
ttacccaataaaatattaccagtattaacgagagagctgttctatactgctgtgacacgt
gcacgctcacgtttatctatatacgctacagagaaggtattgcagcacattattaaaact
aaaaccctgcgaagcagtggccttatcgaacgacttgccaccgattaa
DBGET
integrated database retrieval system
