Sodalis endosymbiont of Henestaris halophilus: HBA_0129
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Entry
HBA_0129 CDS
T05311
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
seny
Sodalis endosymbiont of Henestaris halophilus
Pathway
seny03030
DNA replication
seny03410
Base excision repair
seny03420
Nucleotide excision repair
seny03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
seny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HBA_0129 (polA)
03410 Base excision repair
HBA_0129 (polA)
03420 Nucleotide excision repair
HBA_0129 (polA)
03440 Homologous recombination
HBA_0129 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
seny03032
]
HBA_0129 (polA)
03400 DNA repair and recombination proteins [BR:
seny03400
]
HBA_0129 (polA)
Enzymes [BR:
seny01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HBA_0129 (polA)
DNA replication proteins [BR:
seny03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HBA_0129 (polA)
DNA repair and recombination proteins [BR:
seny03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HBA_0129 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HBA_0129 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
IMS_HHH
HHH
Motif
Other DBs
NCBI-ProteinID:
SNC58406
UniProt:
A0A2C8CUZ4
LinkDB
All DBs
Position
I:188433..191228
Genome browser
AA seq
931 aa
AA seq
DB search
MVQITENPLILVDGSSYLYRAYYVLPLLTNSAGEPTGAMYGVLNMLKSLLIKYQPSHVAV
IFDTKGKTFRDELFEHYKSRRPPMPDDLCNQIKPLYNMIKAMGLPLLAINGVEADDVIGT
LAQSAERNGRDVLISTGDKDMAQMVSPHITLINTMSNIIFGPEEVQLKFGVPPQLIIDYL
ALIGDNSDNIPGIPGIGKKTAQVLLQNFGGLKNLYKQLDNISTLRFRGAKTMAAKLAQHR
ELAFLSYKLAKIKTDVELDLSYDELMVQKLESKTLMILFQRYEFKRWIRDLEAGKWLQNS
KSAVALPSPFTAPRRFTAQEEPINPSSKNNYFIINKIKTLEKWIALIRSTGVFAVNTETD
GLNTLTANLVGLCFAIRSGEIAYLPMGHNYLDTSNQLDRAVALAMLKPVLEDPSISKIGQ
NLKFDLKVLNRYGIKLSGIIFDTMLESYVLNSSAGRHDIDSLIDRFLQFTTVNFGEIAGK
KRTKLTFNQIAFKTNDPYATKNANTILRLHQKLWPLIKQASELKKIFEEIEMPLVPVLSR
IEHTGVLIDENILTVHSIEISKRLEALKQKAHQLAKEPFNLSSTKQIQTIFYDKQKLPVL
KKTPRGTPSTNEEVLAKLALDYPLPKLILEYRSLAKLKSTYTDKLPQMINPVSKRIHTSY
NQAITVTGRLSSSDPNLQNIPVRTDEGRRIRQAFIAPPNSFIVTADYSQIELRIMAHLSR
DPGLLNAFAESKDIHCVTAAEIFGMPLDKVTQDQRRRAKTINFGLIYGMSAFGLARQLSI
KHSEAQQYMNFYFKRYPSILKYMRETRRQAIEKGYVTTLNGRRLYLKNIYSRNGTRNKSA
DRAAINAPMQGTAADIIKRAMIAIDSWLQHEAPRVRMIMQVHDELIFEVQQDVVEINTTK
IKSLMEGCSMLDVPMQVDIGIGTNWDEAHSK
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaaattacagaaaacccactcatactagtagatggttcttcttatctttaccgc
gcctattatgtattaccactgctgaccaatagtgcaggtgaacctacgggagcaatgtac
ggtgtattaaatatgcttaaaagtctgctaataaaataccaaccaagccacgtagcagtt
atatttgataccaaaggtaagacctttcgcgatgaattatttgagcattacaaatcacgt
cgtcctcctatgccggacgatttatgcaatcagataaaaccgctatacaatatgatcaaa
gctatggggctaccattgctagctataaatggtgtagaagccgatgatgttatcggtacg
ctagcgcagtcggcagagcgcaacggacgagatgtgttgataagcacgggtgataaagac
atggcgcaaatggtatcacctcacattacattaatcaataccatgtcgaatattatcttt
ggtccagaagaggtgcaactaaaatttggcgtaccaccacagctgatcattgattatctg
gcacttattggcgataactctgataatattccgggtattccaggaataggaaaaaaaact
gcacaggtgctattacaaaattttggtggtttgaaaaacctatataaacaactggataac
atcagcactttacgtttccgtggcgctaaaacaatggctgcaaaactagctcagcatcgc
gaattagcatttctttcctataagttagcgaagattaaaaccgatgtggaactagattta
tcttatgatgagctaatggtgcaaaaacttgagagtaaaaccctcatgatattatttcag
cgttatgaatttaaacgctggatacgcgacttagaagctggcaaatggctacagaatagc
aaaagcgccgttgctttgccatcgccttttaccgcaccacgacgttttaccgcccaggaa
gaaccaattaatccatcatcaaaaaataattattttattatcaataagataaaaacctta
gagaaatggattgccttaatacgaagcactggtgtattcgcggtcaacaccgaaacagac
gggctgaatacactaactgctaatcttgtaggattgtgctttgccataaggtcaggagaa
atagcctatctgccaatgggtcacaactatttagatacatcaaatcaacttgatcgcgca
gtcgcattggcaatgctaaaaccagtgctagaagatccttccattagtaaaattggtcaa
aatctaaagtttgatcttaaggttctaaaccgatatggaattaaattatctggtattata
ttcgatacaatgttagaatcttacgtgctaaacagcagcgctggacgccacgatatagat
agtttaatagaccgttttttacagtttactaccgtgaatttcggggaaatagctggtaaa
aaacgtaccaaactaacgtttaatcaaattgcatttaaaacaaatgatccctacgctaca
aaaaacgctaacacgatactacgtttgcatcagaagctgtggccgctaattaagcaggca
tcggaactgaaaaagatttttgaagaaatcgagatgccgctagtaccagttctctctcgc
atcgaacatactggtgtgctcattgacgaaaatatactcaccgtgcattcgatagagata
agcaaacgccttgaagcgcttaagcaaaaagcacatcagctagctaaagaaccgttcaat
ctttcctctacaaaacaaatacaaacaattttctacgataagcaaaaactgccggtgcta
aaaaaaaccccgaggggtaccccttctaccaatgaagaggtgctagcaaaattagcgcta
gattacccgctgccaaagctaattttagaataccgaagtctagccaaacttaaatccact
tacacagataaactaccgcaaatgatcaacccagtatcaaaacggatacatacctcttat
aatcaagccattaccgtaacgggacgcctatcttctagtgatcctaacctacagaatata
ccagtgcgcactgatgagggaagacgtatacgacaggcgtttattgcgcctccaaactcg
tttatcgtaacggccgactattcacaaattgagttgcgcattatggcgcatctatctcgc
gatcccggattactgaatgcttttgctgaaagtaaagatattcattgcgttaccgccgcc
gagatatttggtatgccgttagataaagtaactcaggatcagcgtcgccgtgccaaaact
attaactttggcttgatttacggaatgagcgcctttggtctagctcgtcagttgtcaata
aagcactcagaagcgcagcaatatatgaatttctatttcaagcggtaccccagtattttg
aaatatatgagagaaactcgcagacaagctattgagaaaggctatgtcacaactctgaac
gggaggcgactttatttgaaaaatatttactcacgtaacggtacacgtaataaaagcgca
gatcgcgcggctatcaatgcgcctatgcaaggcacagcagctgatattattaaacgagca
atgattgcgatcgacagttggctgcagcatgaagctccgcgggttcgcatgattatgcag
gttcatgatgaattgatatttgaagtgcaacaggatgtagtcgagatcaacacaacaaaa
atcaaatctctaatggaaggttgttctatgttagatgtaccgatgcaggtagacataggt
atcggtacaaactgggatgaagctcattcaaaatag
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