Sodalis endosymbiont of Henestaris halophilus: HBA_0386
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Entry
HBA_0386 CDS
T05311
Symbol
ompC
Name
(GenBank) Outer membrane protein C precursor
KO
K09475
outer membrane pore protein C
Organism
seny
Sodalis endosymbiont of Henestaris halophilus
Pathway
seny01501
beta-Lactam resistance
seny02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
seny00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HBA_0386 (ompC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HBA_0386 (ompC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
seny02000
]
HBA_0386 (ompC)
Transporters [BR:
seny02000
]
Other transporters
Pores ion channels [TC:
1
]
HBA_0386 (ompC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_1
MipA
Motif
Other DBs
NCBI-ProteinID:
SNC58643
LinkDB
All DBs
Position
I:640635..641741
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AA seq
368 aa
AA seq
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MKMQYLSVLIFAMVIVGSAEAAEVYHKDGNTLDLYGTFNGMRYIFSDDDKNGDRSFIRYG
FRGEAMLSNELIGLGTWEQGAGLSYAESEGDNRTFTCLGFVGIKFGDAGSIDYGRNYGVL
HDVNAWTDVMPEFGGNTTVTDNFFAGRANSMLTYRNTNFFGMVDGLNFALQYQGKNNSKT
NDKKGCSLQKGNGNGYGLSVTYDLSNSVSAGAAVSSSNRTLFQQSLDLVHNQGKKTKAYS
LGLKYDTYNVYLAALYHDTQNMTPFACFSSKNYGFAEKAHNLELVAQYQFNSGLRPSLGY
IQSCIHGDQKGKRYDIKRYIELGASYKFNKNMSTFVDYRINLLSSNKLSCIAQKPANNIV
ALGINYMF
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgcagtatttatctgtactcatttttgctatggttattgtcggtagtgccgag
gctgccgaagtttatcataaagatggcaacacattggatttatacggtacgttcaatggc
atgcgttatatatttagtgatgatgataaaaacggcgatcgttctttcatccgttatggc
ttccgtggtgaagccatgcttagcaacgagcttattggtttaggtacttgggagcaggga
gccggtctaagttacgccgaaagcgagggggataacagaacctttacttgccttgggttt
gtcggtattaagtttggtgatgcaggtagcattgactatggccggaactacggcgtactg
cacgacgtcaatgcctggactgatgtgatgccagaattcggcggcaatactactgttact
gataatttctttgctggtcgggccaatagtatgcttacgtatcgtaatactaattttttt
gggatggtggatggcttgaattttgcgttgcaatatcagggtaaaaataacagcaaaaca
aacgataaaaaaggttgcagtcttcagaaaggaaatggtaatggttatggtctgtctgtt
acttatgatttgagtaacagcgtgtcagctggtgcagccgttagcagtagcaaccgtacg
ctatttcagcaatctttagatttagttcataatcaaggtaaaaaaactaaagcctactct
ttaggcttgaaatatgatacttataatgtttacttggccgcgctttatcatgatacccaa
aacatgactccatttgcttgtttttcaagtaaaaattacggctttgctgaaaaagcacat
aatcttgaactagtcgcacaatatcagtttaactctggtttaaggccttctcttggctac
atacagtcgtgcattcacggcgaccagaagggcaaaagatatgatatcaaaagatacata
gaattaggcgctagctataaatttaataagaatatgtcaacttttgttgactatcgcatt
aatcttctgtcgagtaacaaactgagttgtatcgcgcagaaacctgctaataacattgtt
gcattgggtataaattatatgttctag
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