Sodalis endosymbiont of Henestaris halophilus: HBA_0713
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Entry
HBA_0713 CDS
T05311
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
seny
Sodalis endosymbiont of Henestaris halophilus
Pathway
seny03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
seny00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HBA_0713 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seny03019
]
HBA_0713 (rnc)
03009 Ribosome biogenesis [BR:
seny03009
]
HBA_0713 (rnc)
03036 Chromosome and associated proteins [BR:
seny03036
]
HBA_0713 (rnc)
Enzymes [BR:
seny01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
HBA_0713 (rnc)
Messenger RNA biogenesis [BR:
seny03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HBA_0713 (rnc)
Ribosome biogenesis [BR:
seny03009
]
Eukaryotic type
90S particles
RNase
HBA_0713 (rnc)
Prokaryotic type
rRNA processing factors
HBA_0713 (rnc)
Chromosome and associated proteins [BR:
seny03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
HBA_0713 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
DND1_DSRM
DUF3052
Motif
Other DBs
NCBI-ProteinID:
SNC58942
LinkDB
All DBs
Position
I:complement(1181519..1182199)
Genome browser
AA seq
226 aa
AA seq
DB search
MNYILVNKIQKKLGYTFQQHDLLLQALTHRSASKKHNERLEFLGDSILNYVITNALYQRF
SHLDEGYMSRMRAKLVRGNMLAKMAQEFELGECLRLGPGELKSGGFRRESILANTVEALI
GGVFLDSDIHTVEKLILSWYRIRLDDINLSDKQKDPKTRLQEYLQERHLPLPIYLVVQVR
GEAHNQTFTIHCQISKLMHSIVGSGSSRRKAEQAAAEQALKLLELE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaattacatattagtaaataagatacaaaagaaactaggctacacttttcagcaacac
gatcttttgttacaggcgttaacgcatcgtagcgctagcaaaaaacacaatgagcgccta
gaatttctaggtgattctatattaaactatgttatcactaatgcgctttatcagcgtttc
tctcacctagatgagggatacatgagccgtatgcgcgctaagctggtgcgaggcaatatg
cttgcaaaaatggcgcaagaatttgagctaggtgaatgtttacgtcttggtccgggggag
ctgaaaagcggcggtttccgccgtgaatccattttagctaacacagtagaagctttgatc
ggtggtgtattcttagacagcgatattcatactgtcgaaaagctgatccttagttggtac
cgaatacgtttagatgacattaatctcagcgataagcaaaaggatccaaaaacccggctc
caggaatatcttcaagaacgccatttgcctcttccaatctatctagtagtgcaagtgcgc
ggagaagctcacaatcagacatttacaatacactgtcagatcagcaaactcatgcattca
atagtcggtagtggctcaagccggcgtaaagctgagcaggcagcagcggaacaagcactt
aaactgttggaacttgaatga
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