KEGG   Sodalis endosymbiont of Henestaris halophilus: HBA_0777
Entry
HBA_0777          CDS       T05311                                 
Symbol
spoVD
Name
(GenBank) Stage V sporulation protein D
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
seny  Sodalis endosymbiont of Henestaris halophilus
Pathway
seny00550  Peptidoglycan biosynthesis
seny01100  Metabolic pathways
seny01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:seny00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    HBA_0777 (spoVD)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    HBA_0777 (spoVD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:seny01011]
    HBA_0777 (spoVD)
Enzymes [BR:seny01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     HBA_0777 (spoVD)
Peptidoglycan biosynthesis and degradation proteins [BR:seny01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   HBA_0777 (spoVD)
SSDB
Motif
Pfam: Transpeptidase PBP_dimer PBP_dimer_2
Other DBs
NCBI-ProteinID: SNC59005
UniProt: A0A2C8CXJ2
LinkDB
Position
I:complement(1290086..1291993)
AA seq 635 aa
MKIKCIRFRNYSTESTLFLRRAVVAFAGIIILTSILIVNIYQLQIIRFEDYCTRSNENRI
KLVPIAPSRGIIYDRNGIPLALNRTIYQLELVPEKVDNVSQTIAALRPIVDLTNDDISNF
EKERKRYSSFASLPLKVNLTEVQQACFAVNQYNFPGVEVKGYQRRYYPYNSALTHVIGYV
SKINDHDVERLEKEGSLSNYAATHDIGKLGVERYYERILHGKAGYEKVEVNNRGQVIRQL
HEQPPQAGKDITLTLDLNLQQYIEKLLVGSRAAVVVVDPRDGGIRALVSNPSYDPNLFVD
GISRNEYQMLLKDENCPLINRATQGLYPPASTVKPYISVSALTLGVINKSFSLFDPGWWQ
LPGSEKRYRDWKRWGHGWLNVTRALEESADTFFYQVAYDMGIDRLAEWMTKFGYGRYTGI
DLLEERVGVMPTRDWKISRFKKPWYKGDTIPVGIGQGYWISTPVQMSKALMTLINDGLVR
MPHLLESTREDDRQVPYCQPEYEQIGDPYSDFWKIAKDGMYGVANRPNGTAYKSFADAPY
KVAAKSGTAQVYGLKAHETYNAYKISERMRDHKLMTAFAPYNKPTVSVVVILENGGIGTS
MVGTITRQILDHIFMCHNATYLPAESPIVPGNHID
NT seq 1908 nt   +upstreamnt  +downstreamnt
atgaaaataaaatgtattcgctttcgcaattattcaactgagtcgacgctattcttgcgt
cgtgctgttgttgcttttgctggcattataatattaactagtatacttatcgttaatata
taccaattgcaaattattcgtttcgaggattactgcactcgctccaatgaaaatcgtatt
aaattggttcctatcgcgcctagtcgcggcattatatacgaccgcaatggcatcccgttg
gcactaaatcgcaccatttatcagttggagctggtaccggaaaaagtggataatgtatcc
caaacaattgctgctctacgcccgatagtcgatttgaccaatgatgacatctctaatttt
gaaaaagagcgaaaacgttacagtagctttgcctcgttaccacttaaagttaatttgact
gaagtgcaacaagcatgttttgccgttaatcagtacaatttccctggcgtcgaagtaaag
ggttaccaacgtcgctattatccttacaactcggctcttacgcatgttatcggctatgta
tcgaaaataaacgatcacgacgtagaacgtttggagaaagaaggaagcctatcaaactat
gctgctactcatgatatcggtaagttaggtgtcgaacgctactatgaaagaattttgcac
ggtaaagccggttacgaaaaggttgaggtcaataaccgtggccaggtgattcgtcaactg
cacgagcagccgccgcaggcgggtaaggatattaccttaacgttggatcttaacttgcag
caatatatcgaaaaactgctagttggtagtcgtgccgcagtggttgtggtagatccccgc
gacggtggcatacgtgcactagtgtctaacccaagttatgatccaaacttgtttgtcgat
ggtatttctaggaatgaataccaaatgttattgaaagatgaaaactgtcctcttattaat
cgtgccacccagggtttgtacccgcccgcctccactgtgaaaccctatatctcagtctct
gcgctaactcttggcgtaatcaataaaagcttttcactatttgatccgggctggtggcaa
ttacctggttccgaaaaacgctatcgtgactggaagcgctgggggcatggttggttaaac
gttacccgtgcgctggaagaatcagcggacactttcttctatcaagtggcatatgatatg
ggcattgacaggcttgccgaatggatgactaaatttggctatggcagatatactggtatc
gatcttttagaagaacgcgttggtgtaatgccgacccgagactggaaaatatcgcggttc
aaaaaaccctggtacaagggagatactattccagttggaataggccaaggctattggatc
tctacgccagtgcaaatgtcaaaagcattaatgacactaattaacgatggcttagttcgt
atgccgcatttactagaaagcacgcgggaagatgaccggcaggttccttactgtcaacca
gaatatgagcaaatcggcgatccttattctgatttctggaaaattgctaaagacggtatg
tatggcgtagccaaccggccgaacggtactgcgtataagagtttcgccgacgctccttac
aaggttgcggctaaatctggtactgctcaggtatatgggctgaaggcgcacgaaacctac
aatgcctataaaatatcggaacgtatgcgcgatcataagctgatgaccgcctttgccccc
tataataaacccaccgtgagcgtggtagtaattctagaaaatggaggtattggtacgtcg
atggtcggtaccattactcgtcaaatattggatcacatctttatgtgccataatgccaca
tatttaccggcggaatcgccgattgtgcccggcaaccatattgattaa

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