Sodalis endosymbiont of Henestaris halophilus: HBA_0777
Help
Entry
HBA_0777 CDS
T05311
Symbol
spoVD
Name
(GenBank) Stage V sporulation protein D
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
seny
Sodalis endosymbiont of Henestaris halophilus
Pathway
seny00550
Peptidoglycan biosynthesis
seny01100
Metabolic pathways
seny01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
seny00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HBA_0777 (spoVD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HBA_0777 (spoVD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
seny01011
]
HBA_0777 (spoVD)
Enzymes [BR:
seny01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HBA_0777 (spoVD)
Peptidoglycan biosynthesis and degradation proteins [BR:
seny01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HBA_0777 (spoVD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
SNC59005
UniProt:
A0A2C8CXJ2
LinkDB
All DBs
Position
I:complement(1290086..1291993)
Genome browser
AA seq
635 aa
AA seq
DB search
MKIKCIRFRNYSTESTLFLRRAVVAFAGIIILTSILIVNIYQLQIIRFEDYCTRSNENRI
KLVPIAPSRGIIYDRNGIPLALNRTIYQLELVPEKVDNVSQTIAALRPIVDLTNDDISNF
EKERKRYSSFASLPLKVNLTEVQQACFAVNQYNFPGVEVKGYQRRYYPYNSALTHVIGYV
SKINDHDVERLEKEGSLSNYAATHDIGKLGVERYYERILHGKAGYEKVEVNNRGQVIRQL
HEQPPQAGKDITLTLDLNLQQYIEKLLVGSRAAVVVVDPRDGGIRALVSNPSYDPNLFVD
GISRNEYQMLLKDENCPLINRATQGLYPPASTVKPYISVSALTLGVINKSFSLFDPGWWQ
LPGSEKRYRDWKRWGHGWLNVTRALEESADTFFYQVAYDMGIDRLAEWMTKFGYGRYTGI
DLLEERVGVMPTRDWKISRFKKPWYKGDTIPVGIGQGYWISTPVQMSKALMTLINDGLVR
MPHLLESTREDDRQVPYCQPEYEQIGDPYSDFWKIAKDGMYGVANRPNGTAYKSFADAPY
KVAAKSGTAQVYGLKAHETYNAYKISERMRDHKLMTAFAPYNKPTVSVVVILENGGIGTS
MVGTITRQILDHIFMCHNATYLPAESPIVPGNHID
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaaatgtattcgctttcgcaattattcaactgagtcgacgctattcttgcgt
cgtgctgttgttgcttttgctggcattataatattaactagtatacttatcgttaatata
taccaattgcaaattattcgtttcgaggattactgcactcgctccaatgaaaatcgtatt
aaattggttcctatcgcgcctagtcgcggcattatatacgaccgcaatggcatcccgttg
gcactaaatcgcaccatttatcagttggagctggtaccggaaaaagtggataatgtatcc
caaacaattgctgctctacgcccgatagtcgatttgaccaatgatgacatctctaatttt
gaaaaagagcgaaaacgttacagtagctttgcctcgttaccacttaaagttaatttgact
gaagtgcaacaagcatgttttgccgttaatcagtacaatttccctggcgtcgaagtaaag
ggttaccaacgtcgctattatccttacaactcggctcttacgcatgttatcggctatgta
tcgaaaataaacgatcacgacgtagaacgtttggagaaagaaggaagcctatcaaactat
gctgctactcatgatatcggtaagttaggtgtcgaacgctactatgaaagaattttgcac
ggtaaagccggttacgaaaaggttgaggtcaataaccgtggccaggtgattcgtcaactg
cacgagcagccgccgcaggcgggtaaggatattaccttaacgttggatcttaacttgcag
caatatatcgaaaaactgctagttggtagtcgtgccgcagtggttgtggtagatccccgc
gacggtggcatacgtgcactagtgtctaacccaagttatgatccaaacttgtttgtcgat
ggtatttctaggaatgaataccaaatgttattgaaagatgaaaactgtcctcttattaat
cgtgccacccagggtttgtacccgcccgcctccactgtgaaaccctatatctcagtctct
gcgctaactcttggcgtaatcaataaaagcttttcactatttgatccgggctggtggcaa
ttacctggttccgaaaaacgctatcgtgactggaagcgctgggggcatggttggttaaac
gttacccgtgcgctggaagaatcagcggacactttcttctatcaagtggcatatgatatg
ggcattgacaggcttgccgaatggatgactaaatttggctatggcagatatactggtatc
gatcttttagaagaacgcgttggtgtaatgccgacccgagactggaaaatatcgcggttc
aaaaaaccctggtacaagggagatactattccagttggaataggccaaggctattggatc
tctacgccagtgcaaatgtcaaaagcattaatgacactaattaacgatggcttagttcgt
atgccgcatttactagaaagcacgcgggaagatgaccggcaggttccttactgtcaacca
gaatatgagcaaatcggcgatccttattctgatttctggaaaattgctaaagacggtatg
tatggcgtagccaaccggccgaacggtactgcgtataagagtttcgccgacgctccttac
aaggttgcggctaaatctggtactgctcaggtatatgggctgaaggcgcacgaaacctac
aatgcctataaaatatcggaacgtatgcgcgatcataagctgatgaccgcctttgccccc
tataataaacccaccgtgagcgtggtagtaattctagaaaatggaggtattggtacgtcg
atggtcggtaccattactcgtcaaatattggatcacatctttatgtgccataatgccaca
tatttaccggcggaatcgccgattgtgcccggcaaccatattgattaa
DBGET
integrated database retrieval system