Sodalis endosymbiont of Henestaris halophilus: HBA_0919
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Entry
HBA_0919 CDS
T05311
Symbol
ihfB
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
seny
Sodalis endosymbiont of Henestaris halophilus
Brite
KEGG Orthology (KO) [BR:
seny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
seny03032
]
HBA_0919 (ihfB)
03036 Chromosome and associated proteins [BR:
seny03036
]
HBA_0919 (ihfB)
03400 DNA repair and recombination proteins [BR:
seny03400
]
HBA_0919 (ihfB)
DNA replication proteins [BR:
seny03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HBA_0919 (ihfB)
Chromosome and associated proteins [BR:
seny03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
HBA_0919 (ihfB)
DNA repair and recombination proteins [BR:
seny03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
HBA_0919 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
tRNA_anti_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
SNC59130
LinkDB
All DBs
Position
I:complement(1559723..1560007)
Genome browser
AA seq
94 aa
AA seq
DB search
MTKSELIEKLVDQHVHIRAKVVENAVKEILEHMATTLAAGERIEIRGFGSFSLHYRASRI
GRNPKTGDKVELDGKCVPHFKPGKELRDRVNSYV
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatctgaacttatcgaaaaactagttgaccagcatgttcatatccgggcaaaa
gtagttgaaaatgcagtaaaagagatactcgagcatatggcgacgacactcgccgctggc
gaacgcatcgaaatacgcggtttcggtagtttttcccttcattaccgcgcctcgcgcatc
ggtcgcaatcctaaaactggtgataaggtagagttggatggcaaatgtgttccacatttt
aaaccaggtaaagagttacgcgatcgtgtcaatagctacgtttag
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