Salmonella enterica subsp. enterica serovar Typhimurium 14028S: STM14_0603
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Entry
STM14_0603 CDS
T01714
Symbol
ybbB
Name
(GenBank) tRNA 2-selenouridine synthase
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
seo
Salmonella enterica subsp. enterica serovar Typhimurium 14028S
Brite
KEGG Orthology (KO) [BR:
seo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
seo03016
]
STM14_0603 (ybbB)
Enzymes [BR:
seo01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
STM14_0603 (ybbB)
Transfer RNA biogenesis [BR:
seo03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
STM14_0603 (ybbB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhodanese
T2SSE
AAA_16
Zeta_toxin
AAA_22
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ACY87120
UniProt:
A0A0F6AXZ8
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All DBs
Position
complement(574380..575474)
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AA seq
364 aa
AA seq
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MQDRQKAQDYRALLLADTPLIDVRAPIEFEQGAMPGAINLPLMMDDERAAVGTCYKRQGA
DAALALGHRLVCGDIRQQRLEAWKAAYQRFPNGYLCCARGGQRSHIVQRWLQETGIDCPL
IEGGYKALRQTAIQATWQLAQKPILLIGGCTGSGKTQLVRQQPNGVDLEGLARHRGSSFG
RTLNPQLSQASFENKLAVELLKINARQTLKRWVLEDEGRTIGANHLPECLRERMAQAPIA
VVEDPFALRLERLREEYFIRMHHDFTHAYGDEAGWQAYSEYLHHGLFAIRRRLGLQRFAE
LTDTLDRALAEQLSSGSTDGHMAWLVPLLNEYYDPMYRYQLEKKAANIVFRGTWQDVANW
LKAQ
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacagacaaaaagcacaggactatcgcgcgctcctccttgccgatacgccttta
attgatgtacgcgcgccgattgagtttgaacagggcgccatgccgggcgctatcaacctg
ccattgatgatggatgacgagcgagccgccgtcggcacctgctacaaacgtcagggcgcg
gatgcggcgttagcgctggggcatcggctggtttgcggcgacattcgccagcagcggctt
gaggcctggaaagccgcgtatcaacgtttccccaacgggtatctgtgctgcgcgcgcggc
ggtcagcggtcacatatcgtacaacgttggctgcaagaaacagggattgactgcccgctt
attgaaggcggctataaagcgctgcgccagacagcaattcaggcgacctggcaactggcg
caaaaaccgatacttttaattggcggctgtacgggcagcggcaaaacgcaactggtacga
caacagcccaacggcgtggatctggaaggtctcgcgcgtcatcgcggctcctcttttggc
cgcacgctgaacccccagctcagccaggccagttttgaaaacaaacttgccgttgaattg
ctgaaaattaacgcgcgtcagacgctaaaaaggtgggtactggaagatgaagggcgaacg
atcggcgccaaccatctgcctgagtgtttacgcgaaagaatggcgcaggcccccattgcg
gtagtggaagatccgtttgcgcttcgtctggaacgactgcgtgaagagtatttcatccgt
atgcatcacgacttcacccacgcctacggcgatgaagccggttggcaggcgtatagtgaa
tatcttcatcatggactgttcgctattcgccgccgtctggggttgcaacgctttgccgaa
ctgacggacacgctggatagggcgctggcagagcaattatccagcggcagcactgacggc
catatggcatggctggttccgctacttaacgaatattacgacccaatgtatcgctatcaa
ctggagaaaaaagccgcgaatatcgtttttcgcggcacatggcaagacgttgccaactgg
ctaaaagcgcaatag
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