Salmonella enterica subsp. enterica serovar Typhimurium 14028S: STM14_0638
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Entry
STM14_0638 CDS
T01714
Symbol
fimD
Name
(GenBank) outer membrane usher protein precursor
KO
K07354
outer membrane usher protein
Organism
seo
Salmonella enterica subsp. enterica serovar Typhimurium 14028S
Brite
KEGG Orthology (KO) [BR:
seo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
seo02035
]
STM14_0638 (fimD)
Bacterial motility proteins [BR:
seo02035
]
Pilus system
Fimbrial proteins
STM14_0638 (fimD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
Motif
Other DBs
NCBI-ProteinID:
ACY87155
UniProt:
A0A0F6AY33
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All DBs
Position
606742..609354
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AA seq
870 aa
AA seq
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MKKTTWFAGRFPGYVSPLSSVALSVLAALCPLTSRGESYFNPAFLSADTASVADLSRFEK
GNHQPPGIYRVDIWRNDEFVATQDIRFEAGAVGTGDKSGGLMPCFTPEWIKRLGVNTAAF
PVSDKGVDTTCIHLPEKIPGAEVAFDFASMRLNISLPQASLLNSARGYIPPEEWDEGIPA
ALINYSFTGSRGTDSDSYFLSLLSGLNYGPWRLRNNGAWNYSKGDGYHSQRWNNIGTWVQ
RAIIPLKSELVMGDSNTGNDVFDSVGFRGARLYSSDNMYPDSLQGYAPTVRGIARTAAKL
TIRQNGYVIYQSYVSPGAFAITDLNPTSSSGDLEVTVDEKDGSQQRYTVPYSTVPLLQRE
GRVKYDLVAGDFRSGNSQQSSPFFFQGTVIAGLPAGLTAYGGTQLADRYRAVVVGAGRNL
GDWGAVSVDVTHARSQLADDSTHQGQSLRFLYAKSLNNYGTNFQLLGYRYSTRGFYTLDD
VAYRSMEGYDYEYDSDGRRHKVPVAQSYHNLRYSKKGRFQVNISQNLGDYGSLYLSGSQQ
NYWNTADTNTWYQLGYASGWQGISYSLSWSWSESVGSSGADRILAFNMSVPFSVLTGRRY
ARDTILDRTYATFNANRNRDGDNSWQTGVGGTLLEGRNLSYSVTQGRSSSNGYSGSASAS
WQATYGTLGVGYNYDRDQHDYNWQLSGGVVGHADGITFSQPLGDTNVLIKAPGAKGVRIE
NQTGVKTDWRGYAVMPYATVYRYNRVALDTNTMDNHTDVENNVSSVVPTEGALVRAAFDT
RIGVRAIITARLGGRPLPFGAIVRETASGITSMVGDDGQIYLSGLPLKGELFIQWGEGKN
ARCIAPYALAEDSLKQAITIASATCIRPAS
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagacaacctggtttgcagggcgatttcccggctatgtatcaccgttaagcagc
gtggcgctgtcggtgctggcggcgctgtgtccgctgacgagccgcggcgaaagttatttc
aaccctgcgtttttgtcggcggataccgcgtccgtggcggatttatctcgctttgaaaaa
ggtaatcatcagcctcccggtatttaccgggtggatatctggcgtaacgacgaattcgta
gcgacgcaggatattcgttttgaggcgggcgccgtgggcaccggcgataaatccggcggc
ctgatgccttgttttacaccggagtggattaaacggctgggcgtgaataccgcggcgttc
cctgtctcagataaaggcgtcgataccacgtgtattcaccttcctgagaaaatcccgggc
gcggaggtcgcgttcgatttcgcgtcgatgcgcttaaacattagcttgccgcaggcgtca
ttgctcaacagcgcgcgtggctatatcccgccggaagagtgggatgaagggatacccgcc
gcactcattaattacagttttaccggtagccgcggaacagacagcgatagctattttttg
agtctgctgagtggcttgaactatggcccctggcggttgcgtaataacggagcctggaac
tattcgaaaggggacggctatcattcgcaacgctggaacaacattggcacctgggtacag
cgcgccatcattccgctaaaaagcgaactggtcatgggggacagcaataccgggaacgat
gttttcgacagcgtcggctttcgcggagcgcggctgtactcttctgacaatatgtatccc
gatagcctgcagggctacgcccccacggttagaggaatcgcccggacggcggcaaagctg
acgatacgacagaacgggtatgttatctaccaaagctatgtgtcgccgggcgcgtttgcg
attaccgatcttaatcctacctcttccagcggcgaccttgaggtgacggtagatgaaaaa
gacggtagccaacaacgttacacggtgccttactctaccgttccgctattgcagcgtgag
ggcagggtgaagtatgacctggtggccggggattttcgcagcggcaatagtcagcagtct
tcgccattctttttccagggaacggtgattgccggcctgcctgcggggctgacggcttac
ggcggtacgcaacttgccgatcgttaccgtgccgtggtggtcggggcggggcgaaatttg
ggcgactggggagccgtgtcggttgatgtcacacatgcgcgtagccaactggcagatgac
agcacccatcaggggcaatcgttgcgttttctgtacgccaaatcgctgaataattacggg
actaattttcaattgctgggttaccgctattccacgcgcggattttacaccctggatgat
gtggcatatcgcagtatggaagggtacgactacgaatacgatagcgacggacgccgccat
aaagtgccggtggcgcagagctaccacaatctccgctacagcaaaaaaggccgctttcag
gtcaatatttcgcaaaatctgggggattacgggtcactgtatctttccggcagtcaacaa
aattactggaatacggcggataccaatacctggtatcaactgggatacgccagtggatgg
caaggcataagttattcgctgtcatggtcgtggagcgagtcggtggggagctcaggcgcc
gaccgcattctggcattcaatatgtccgttccgtttagcgttctgaccggacggcgttat
gcgcgcgacactattcttgatcgtacttatgccacgtttaacgccaaccgcaaccgcgac
ggcgacaatagctggcagaccggcgtgggcggcacacttctggaaggacgtaatctgagc
tacagcgtgacgcaagggcgtagcagtagcaatggttatagcggcagcgccagcgctagc
tggcaggcgacgtatggcacgctgggcgtgggatataactacgatcgcgatcagcatgac
tataactggcaactttccggcggcgtggtcggtcatgcggatggtattacgtttagccaa
ccgttgggcgataccaatgtcttgattaaagcgccgggagcgaaaggcgtgcgcatcgaa
aaccagaccggcgtgaaaacggactggcggggctatgcggtaatgccctacgccacggta
tatcgctataaccgcgtcgcgttagataccaacacgatggacaaccataccgatgtcgaa
aataacgtcagcagcgtagtgccgacagagggcgcgctggtgcgggccgcttttgatacg
cggataggcgtaagggcaatcattaccgcgaggcttggcggacgtccgttaccgtttggc
gcgatagtacgagaaaccgccagcggcattaccagtatggtcggcgatgatgggcaaatt
tatctgagcggcttgccgctaaaaggtgaactgttcatccagtggggagaggggaaaaac
gcgcgttgtatcgccccttacgccctggcggaggatagcctgaagcaggcgattacgata
gccagcgcaacctgtatccgtccggcgtcataa
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