Salmonella enterica subsp. enterica serovar Typhimurium 14028S: STM14_2525
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Entry
STM14_2525 CDS
T01714
Symbol
pocR
Name
(GenBank) transcriptional regulator
KO
K27259
AraC family transcriptional regulator, pdu and cob operon regulator
Organism
seo
Salmonella enterica subsp. enterica serovar Typhimurium 14028S
Brite
KEGG Orthology (KO) [BR:
seo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
seo03000
]
STM14_2525 (pocR)
Transcription factors [BR:
seo03000
]
Prokaryotic type
Helix-turn-helix
AraC family
STM14_2525 (pocR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PocR
HTH_AraC
HTH_18
Motif
Other DBs
NCBI-ProteinID:
ACY88970
UniProt:
A0A0F6B381
LinkDB
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Position
complement(2165950..2166861)
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AA seq
303 aa
AA seq
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MISASALNSELINKIAQDFAQATGLAVVVVNIHGDEISELFNFTPFCQLMRQHPQHSTRC
RMSDRCGGLEASKSDQPCIYRCHAGLTDFSIPLVIAGHLVGFVLCGQVRLSNDVELVNIL
NVDDRWQADPELLNEFRNVPEMDYSRVIASADLLKLIVENCLKKQLNFVVIKDNPQQSEA
NKTTRGPTPHDSKMKKALRYIDAHLSDDLRLEDVASHVYLSPYYFSKLFKKYQGIGFNAW
VNRQRMVSARELLCHSDWSIASIARNLGFSQTSYFCKVFRQTYQVTPQAYRQQINENSHP
PSL
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgatttctgcgagcgctctgaactcagaactcattaataaaatcgcacaggattttgca
caagccaccggtctggcggttgtggttgtcaatattcatggtgatgaaatatctgagcta
ttcaatttcacgccgttttgtcagttgatgcggcagcatccccagcatagtacacgttgt
cgtatgagcgatcgctgcgggggactggaggcatcgaagtccgatcaaccctgtatttat
cgttgtcatgccggtctaacggatttttctattccgctggtaatcgcagggcatttagtt
ggctttgttttatgcgggcaggttcgtttaagtaatgacgtggagctggtaaacattctt
aatgttgacgatcgctggcaggctgaccctgagctcttgaatgaatttcggaatgtgcca
gagatggactattcacgcgttatcgcttccgccgatcttcttaaactgattgttgagaat
tgcctgaaaaaacagctcaatttcgtggttatcaaagacaatccgcagcaatcggaggca
aataaaaccactcgtggtcccactccgcatgacagtaaaatgaaaaaagcgcttcgctat
attgatgcgcatttgtccgacgatcttcgtcttgaggatgtcgcctcacatgtctatctc
agcccctattacttcagtaagctattcaagaaatatcagggaatcggatttaatgcgtgg
gtaaaccgccagagaatggttagcgccagagaattgctttgccatagtgactggagtatt
gccagtattgcgcgtaatttaggcttttcgcaaaccagctatttttgcaaagtcttccgc
cagacctatcaggttacgccgcaggcttatcgccagcagataaatgagaattctcatcct
ccatcgttatga
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