Salmonella enterica subsp. enterica serovar Typhimurium 14028S: STM14_2621
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Entry
STM14_2621 CDS
T01714
Symbol
alkA
Name
(GenBank) 3-methyl-adenine DNA glycosylase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
seo
Salmonella enterica subsp. enterica serovar Typhimurium 14028S
Pathway
seo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
seo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
STM14_2621 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seo03400
]
STM14_2621 (alkA)
Enzymes [BR:
seo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
STM14_2621 (alkA)
DNA repair and recombination proteins [BR:
seo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
STM14_2621 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ACY89066
UniProt:
A0A0F6B3H6
LinkDB
All DBs
Position
complement(2263041..2264012)
Genome browser
AA seq
323 aa
AA seq
DB search
MTLAKCRRGDNWNMKARRYVRLAFMLKGQIKEKSMFTLSWQPPYDWSWMLGFLAARAVDG
VETVGEGFYARSLVVGEHRGLVSVRPHLPTHTVQVSVSAGLLPVAPACLAKVSRLFDLDC
QPAQVAAVLGPLGEDRPGLRLPGSVDTFEQGVRAILGQLVSVAMAARLTAKVARRYGEAL
PDAPDYVCFPGPETLALADPLALKALGMPLRRAEALIHLAQATLAGKLALAAPPDIEQSV
KNLQTFPGIGRWTANYFALRGWQAKDIFLPDDYLIKQRFAGMTPAQIRRYAERWKPWRSY
ALLHIWYTHGWQPSMDSEIAGIQ
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
gtgactttagcgaaatgtcgtcgcggcgacaactggaatatgaaagcaaggcgttacgtg
cgattagcgtttatgctgaaaggtcaaataaaggagaaaagtatgtttaccctgagctgg
cagccgccttacgactggtcgtggatgttgggctttcttgccgcgcgtgcggtggacggc
gtggaaacagtaggcgagggcttttatgcgcgcagcctggtggtgggcgagcatcgcgga
ctggtcagcgtgaggccccatctgcccacccacactgtgcaggttagcgtgagcgccgga
ttacttcccgtcgcgccggcgtgtctggcgaaagtttcgcgtctgtttgatcttgactgc
cagcccgcgcaggttgccgccgtgctggggccactgggcgaggacagaccggggctgcgt
ttaccgggatcggttgatacgtttgaacagggcgtgcgggcgatactggggcaactggtg
agtgtcgcgatggcggcaaggttgacggcgaaagtggcgcgccgctatggcgaggcgttg
ccggatgcgcccgattatgtctgttttcccggtccggaaacgctggcgttggccgatccg
ctggcgcttaaagctctggggatgccgctgcggcgcgccgaagcgctgattcatctggcg
caggcgacgctggcgggaaaactggcgctcgccgcgccgccggatattgagcagagcgtt
aaaaatttacaaacgtttccgggaattggccgctggacggcgaactatttcgccctgcgc
ggttggcaggcaaaagatatctttttgcccgatgattacttaattaagcagcgcttcgcc
gggatgacgcccgcgcagatccgtcgctacgcggagcgctggaaaccgtggcgttcctac
gcgctactgcatatctggtatacccacggctggcaaccgtcaatggatagcgaaatagct
ggtattcagtaa
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integrated database retrieval system
