Salmonella enterica subsp. enterica serovar Typhimurium 14028S: STM14_3078
Help
Entry
STM14_3078 CDS
T01714
Symbol
shdA
Name
(GenBank) AIDA autotransporter-like protein
Organism
seo
Salmonella enterica subsp. enterica serovar Typhimurium 14028S
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PATR
Autotransporter
AC_1
Motif
Other DBs
NCBI-ProteinID:
ACY89510
UniProt:
A0A0F6B4R9
LinkDB
All DBs
Position
complement(2679142..2685111)
Genome browser
AA seq
1989 aa
AA seq
DB search
MAAALGFFSPLAMADNQVSYADAQPHVLDASTPPISYSGTDEGAALYVSGVATVGWQPTT
VTGTGLVIETSGGGADDPDGGKYVSNAISLDHYAILELTDAKITTTGIYTQGISAADGST
LRLTDSTLTIDGNFGVMTLYTGSEATLDGTIVEAANSSSAQVQQGSTLNVLDGSTITLAQ
GQINVVAGNTATDEGSTLNLSDSSVSSAGTMSTIQGTNKAALNLTNATITHTNASGAAVQ
ANNATTLDITGGNITSAGTGVYILASDARIDGATINADGDGIFITSKRKLDGYEDLNALT
VSDANVTSKTVALNIDGSTTINDPIELTNSTFTAPTAIKLGSKATIQAEKTMLTGNIVQT
DASSSSLSLSQGSTLTGSVDAMFTTLSLDDTSQWNMTDPSTVGNLTNDGDITLGNASGST
GTLLTVDNTLTLQDGSQINATLDTANSAPIIKAANVTLDGTLNLSSTATFVAPETDEHFG
SITLIDSQTAITTDFDSVTLDADTSAMPDYLTINAGVDANDNTNYELSTGLSWYAGANSA
RAAHGTFTVDAGSTFTVTSELDETTATSNWNGSKLTKQGDGTLILSNTGNDYGDTEIDGG
ILAAKDAAALGTGDVTIAESATLALSQGTLDNNVTGEGQIVKSGSDELIVTGDNNYSGGT
TISGGTLTADHADSLGSGDIDNSGVLKVGEGELENILSGSGSLVKTGTGELTLSGDNTYS
GGTTITGGTLTADHADSLGSGDIDNSGVLKVGEGDLENTLSGSGSLVKTGTGELTLSGGN
DYSGGTTIIGGTLTADHADSLGTGAVANSGVLQVGEGELENTLSGSGSLVKTGTGELTLS
GDNSYSGGTTIIGGTLTADHADSLGTGAVANSGVLQVGEGELENTLSGSGSLVKTGTGEL
TLSGDNSYSGGTTIIGGTLTADHADSLGTGAVANSGVLQVGEGELENTLSGSGSLVKTGT
GELTLGGDNSYSGATTITDGTLIAANVNALGSGNIDNSGTLILDANGAFELANVTTHSGA
TTALAAGSTLDAGQFTQEDGSTLSIDLGAATDDAVITADSVALGGTLNVTGIGSVTDSWT
PEAYTYTLIGSDSAITTDFDDLTVAGMNREDVDFLTIDGKVDEADNTHYDLTASLSWYAD
RDNATTDAHGTFTLSDPDGSFNVAATLTDVDDTLDPGSRWDGKSLTKEGAGTLILSGDND
YSGGTTINEGTLVAASTTALGTGLVDNNATLVLDADGEVSAVGGITTHSGATTQLALGTS
LDLGDSALIQQDGSTLNVELNSDSVQPLITGSSATLGGDLVVSDASLQARASDAEFQSFK
LMDMTSDISGDFTSLTMNLTDKPDYLTVTGTINPEDASEYLLTEGLSWNATATSATPAHG
TFTLGAGDSFEVTSVLGDKTGNGDWDGKSLTKLGAGKLTLSGANTYSGDTNVQEGTLWLS
GDGSIGEMGSQQAVNVASGATFGGSNGTTVNGKVTNEGTLVFGNSEETGAIFTLNGDLIN
MGTMTSGSSSSTPGNTLYVDGNYTGNGGSLYLNTVLGDDDSATDKLVITGDASGTTDLYI
NGIGDGAQTTNGIEVVDVGGVSTSDAFELKNEVNAGLYTYRLYWNESDNDWYLASKAQSD
DDDSGGDDTPSDGGDDGGNVTPPDDGGDGGNVTPPDDGGDGGDVTPPDHGGDVAPQYRAD
IGAYMGNQWMARNLQMQTLYDREGSQYRNADGSVWARFKAGKAESEAVSGNIDMDSNYSQ
FQLGGDILAWGNGQQSVTVGVMASYINADTDSTGNRGADGSQFTSSGNVDGYNLGVYATW
FADAQTHSGAYVDSWYQYGFYNNSVESGDAGSESYDSTANAVSLETGYRYDIALSNGNTV
SLTPQAQVVWQNYSADSVKDNYGTRIDGQDGDSWTTRLGLRVDGKLYKGSRTVIQPFAEA
NWLHTSDDVSVSFDDATVKQDLPANRAELKVGLQADIDKQWSVRAQVAGQTGSNDFGDLN
GSLNLRYNW
NT seq
5970 nt
NT seq
+upstream
nt +downstream
nt
gtggctgcggcgctcggatttttcagcccgctggctatggccgataatcaggtatcatat
gctgatgcgcagccccacgttctggatgcgtcaacgccgccgataagctattcgggcacc
gatgaaggcgcggcgctatatgtctcgggtgtcgccaccgtcggctggcagcccaccacg
gtcacagggacggggctcgtcattgaaacaagcggaggcggggctgatgatccggatggc
ggtaagtatgtttccaacgccatttcgctggatcattacgctatccttgagcttaccgac
gcgaagataaccactacgggtatttatacccagggtatttccgcagcggatggcagcaca
ctgaggttaacagacagtacgctaacgattgacggcaatttcggcgtaatgacgttgtat
acgggttcagaagcaacgctggacggtaccatcgttgaggcagctaacagcagcagcgcg
caggtgcaacaaggcagtacgctgaacgtgctggacggtagcacaatcaccctggcgcaa
ggccagataaacgttgttgccggaaacaccgcgacagacgagggttccaccctgaacctg
tctgatagctcggtcagctctgcaggtacgatgagcaccatccagggtaccaataaggcc
gctcttaatctcaccaacgcgaccataacacataccaatgccagcggcgcggcggtacag
gccaataacgccactaccctggatattacaggcggcaacattacctctgccggtacgggc
gtgtatattctggcgtcggacgccaggatcgacggcgccaccatcaacgccgacggcgac
ggtatctttataaccagcaaaagaaaactcgacgggtatgaggatctcaacgcgctgacg
gtcagcgacgcaaacgtcacctcaaaaactgtcgcactgaacattgatggcagcacgacc
attaacgaccccattgagctcaccaacagcacctttacggcgccgaccgcgatcaaatta
ggcagcaaagcgactattcaggccgaaaaaacgatgctgaccggcaacattgtccagact
gacgcgtcatcgtcatcgctctctttaagccaggggtccacgttaaccggtagtgtagat
gcgatgtttactacgctgtcgctcgacgacaccagccagtggaacatgaccgacccgtca
accgtcggcaatctgaccaacgacggcgatattacgctgggcaacgcgagcggttcgaca
ggtacgctgctgacggtggacaataccctgaccttgcaggacggcagccagataaacgcg
acgctggataccgccaacagcgcgccaattatcaaagccgccaacgtcacgctggacggg
acgctgaaccttagctcaacggccacctttgtcgcgcccgaaaccgacgaacactttgga
tcgatcacgctgattgattcgcaaactgcaatcactaccgattttgacagcgtaacactg
gatgctgacacctccgctatgccggattatctgacgatcaacgcgggcgttgatgcgaat
gataataccaactacgagttgtctacgggcttgagttggtacgcgggcgcaaattctgcg
cgcgctgcgcatggcacttttaccgttgatgcaggcagtacctttaccgtcaccagcgaa
ctggacgaaaccacggcgacctccaactggaacggcagcaagctaaccaaacaaggcgac
ggcacgctgatcctcagcaacaccggcaacgactacggcgatactgaaattgacggcggc
attctggccgccaaagacgccgccgcgctcggcactggcgatgtgacgattgcagaaagc
gcaacgcttgcgctgagccagggcacgctggataacaacgtgaccggcgagggccaaatt
gtcaaaagcggtagcgatgagctgatcgtgaccggcgataacaactacagcggcggcacc
actatttccggcggtacgctgacggctgaccatgcggattcgctgggcagcggcgatatc
gacaacagcggcgtgcttaaggtgggcgaaggcgagctggaaaacatcctttccggcagc
ggctcgctggtgaaaaccggcacaggcgagctgacgctaagcggcgacaacacttactcc
ggcggcaccaccattaccggcggtacgctgacggctgaccatgcggattcgctgggcagc
ggcgatatcgataacagcggcgtgcttaaggtgggcgaaggcgatctggaaaatacgctt
tccggcagcggttcgctggtgaaaaccggtaccggcgagctgacgttaagcggcggcaac
gattactccggcggcaccaccattatcggcggtacgctgacggctgaccatgcggattcg
ctgggtaccggagctgttgccaacagcggcgtgcttcaggtcggcgagggcgagctggaa
aatacgctttccggcagcggttcgctggtcaaaaccggtacgggcgaactgacgttaagc
ggcgataacagttactccggcggcaccaccattatcggcggtacgctgacggctgaccat
gcggattcgctgggtaccggagctgttgccaacagcggtgtgcttcaggtcggcgagggc
gagctggaaaatacgctttccggcagcggttcgctggtcaaaaccggtacgggcgaactg
acgttaagcggcgataacagttactccggcggcaccaccattatcggcggtacgctgacg
gctgaccatgcggattcgctgggtaccggagctgttgccaacagcggtgtgcttcaggtc
ggtgagggcgagctggaaaatacgctttccggcagcggttcgctggtcaaaaccggtacc
ggcgagctgacgttaggcggcgacaacagctattccggcgccaccactatcactgacggc
acgctgattgccgccaacgtcaacgcgctgggcagcggcaatatcgacaacagcggtacg
ctgatactggatgccaacggcgcatttgagcttgcgaacgtcaccacccatagcggcgcc
actaccgcgctggcagcgggcagcacccttgacgcgggccagttcacccaggaagacggc
agtacgctaagtattgacctcggcgcggccaccgacgacgccgtgattaccgccgacagc
gtcgcgctgggcggcacgctgaatgttaccggcattggcagcgttacagacagctggacg
cctgaggcatacacctacacgctgattggcagcgacagcgccattacgaccgatttcgac
gatctgaccgtcgcgggaatgaatagagaagatgttgacttcctgactatcgacggaaaa
gtcgatgaagcagacaacacccactatgatctgacggcctccctctcctggtatgcggac
agagacaacgccactaccgacgcccacggcacctttaccctgagcgaccctgacggcagc
tttaacgttgcggctacactgacagacgttgacgatacgctggatccgggtagcagatgg
gacggtaaatcgctgaccaaagaaggcgcaggcacgctgatcctctctggcgacaacgac
tacagcggcggcaccaccatcaatgaaggtacgctggtcgccgccagtacgacggcgctg
ggcaccggtctggtagacaataatgccacgctggtgctggacgcagacggtgaagtcagc
gcggtgggcggcatcaccactcatagcggcgcgacgacccaactggcgctcggcacctcg
ttggatctcggcgacagcgcgttaattcagcaagatggcagtacgctgaacgttgagctg
aatagtgactcagtgcaaccgctgattaccggcagcagcgccacgcttggcggcgatttg
gtcgtcagcgacgccagcctgcaagcgcgcgcctccgacgcggagttccagtcctttaaa
ctgatggatatgaccagcgatatcagcggcgactttaccagcctgacgatgaacctcact
gacaagccggactatctgaccgtaaccgggacaatcaatcctgaagatgcgtcagaatat
ctgcttaccgaagggctgagctggaatgcgaccgccacgtcagcgacgccagcacacggc
acgtttaccctgggcgcaggcgacagttttgaagtcaccagcgtactgggcgataaaacc
ggcaacggcgactgggacggtaaatcgctgaccaaactgggcgcgggtaaactgacgctg
agcggcgcgaacacctatagcggcgataccaacgtacaggaaggcacgctatggctgtcc
ggagacggctcgattggcgagatgggcagccagcaggcggtgaacgtcgcctccggggcg
accttcggcggcagcaatggtacgaccgttaacggtaaggtgaccaacgaagggacgctg
gtcttcggcaacagcgaggaaacaggcgctatcttcaccctcaatggcgatctgatcaac
atggggacaatgaccagtggtagcagctccagcacgcctggcaatacgctttatgtcgat
ggcaattacaccggcaacggcggctcgctttacctgaataccgtcctgggcgacgatgat
tcggcaaccgataagttggtcattaccggcgatgcttccggcaccaccgatctgtacatc
aacggcatcggcgatggagcacagaccactaacggtatcgaagtggtggatgttggcggc
gtatcgaccagcgatgcgtttgagctaaaaaatgaggttaacgccggtctgtatacctac
cgtctgtactggaatgaaagtgacaacgactggtatctggcgtcaaaagcacagtctgat
gatgacgacagcggcggtgatgacacgccttcggatggcggtgacgatggcggtaatgtc
acgcctccggacgacggcggcgatggcggtaatgtcacgcctccggacgacggcggcgac
ggcggcgatgtcacgcctccggaccacggcggcgatgtcgcaccgcagtaccgtgcggat
atcggcgcgtacatgggcaaccagtggatggcgcgcaacctgcaaatgcagaccctctat
gaccgcgagggcagccagtatcgtaatgccgatggcagcgtatgggcgcgcttcaaagcg
ggtaaagcggaatccgaggctgtcagcggcaatatcgatatggacagcaactactcccag
ttccagttaggcggcgacattctggcctggggtaacggccagcagagcgttaccgttggc
gtcatggcgagctacatcaacgccgataccgacagcaccggtaaccgtggcgcagacggt
agccagttcaccagtagcggcaacgtagacggctacaaccttggcgtctatgccacctgg
tttgccgatgcccaaacgcatagcggcgcgtatgtcgacagctggtaccaatatggtttc
tacaacaacagcgtagagagcggtgatgcgggatctgaatcttatgattcaaccgctaac
gccgtctcgctggaaactggttatcgctacgatattgcgcttagcaacggtaatactgtc
agtctgacgccgcaggcgcaggttgtctggcagaattactcagcggatagcgtgaaggat
aactacggcacccggatcgatggtcaggatggcgacagttggacaacgcgtctgggtctg
cgtgttgacggcaagctgtacaaaggcagccgtacggttatccagccgtttgctgaagct
aactggctgcacaccagcgatgatgtgtcggtatcgtttgatgatgctacggtgaaacag
gatcttccggctaaccgtgcggagctgaaagtgggtctgcaggcagatatcgataagcag
tggagcgttcgcgctcaggttgccgggcagactggcagcaatgactttggcgatctgaac
ggtagcctcaatctgcgctataactggtaa
DBGET
integrated database retrieval system
