Salmonella enterica subsp. enterica serovar Typhimurium 14028S: STM14_4105
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Entry
STM14_4105 CDS
T01714
Symbol
yrdC
Name
(GenBank) putative ribosome maturation factor
KO
K07566
L-threonylcarbamoyladenylate synthase [EC:
2.7.7.87
]
Organism
seo
Salmonella enterica subsp. enterica serovar Typhimurium 14028S
Brite
KEGG Orthology (KO) [BR:
seo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
seo03009
]
STM14_4105 (yrdC)
03016 Transfer RNA biogenesis [BR:
seo03016
]
STM14_4105 (yrdC)
Enzymes [BR:
seo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.87 L-threonylcarbamoyladenylate synthase
STM14_4105 (yrdC)
Ribosome biogenesis [BR:
seo03009
]
Prokaryotic type
Other maturation factors
STM14_4105 (yrdC)
Transfer RNA biogenesis [BR:
seo03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
STM14_4105 (yrdC)
Prokaryotic type
STM14_4105 (yrdC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sua5_yciO_yrdC
Motif
Other DBs
NCBI-ProteinID:
ACY90496
UniProt:
A0A0F6B7J8
LinkDB
All DBs
Position
complement(3587947..3588519)
Genome browser
AA seq
190 aa
AA seq
DB search
MNNNLPIGSIAAAVDLLNKENVIAYPTEAVFGVGCDPDSETAVTRLLALKQRPVDKGLIL
IAASFEQLKPYIDDSILTAAQRKAVFDCWPGPVTFVFPAPATTPRWLTGRFDSLAVRVTN
HPLVVALCNAYGKPLVSTSANLSGLPPCRTVEEVRAQFGDDFPVVEGATGGRLNPSEIRD
ALTGELFRQG
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
gtgaataataacctgccaataggatctatcgccgcagcggtagatctcctgaataaagaa
aatgtcatcgcttatccaacagaagccgttttcggcgtcggctgcgatcccgatagtgaa
acagccgttacgcgcctgctggcgttaaaacaacggcccgtcgataagggactcattttg
attgccgccagctttgagcagttaaaaccttatattgatgacagcatacttaccgccgca
cagcgtaaagcggtatttgattgctggcccgggccggtaacgtttgtttttcctgcgccc
gcgacaacgccgcggtggctcacgggacgttttgattccctggccgttcgtgttaccaac
cacccgctggtggtcgcgctatgcaatgcgtatggcaaaccgctggtttccaccagcgcc
aatctgagcggattaccgccatgccgtaccgttgaagaggtgcgtgcgcaatttggtgat
gattttccggtggttgaaggcgcaacgggtgggcgtttaaatccttcagaaattcgcgat
gctctgacgggcgaactgtttcgacaggggtaa
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