Salmonella enterica subsp. enterica serovar Typhimurium 14028S: STM14_4628
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Entry
STM14_4628 CDS
T01714
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
seo
Salmonella enterica subsp. enterica serovar Typhimurium 14028S
Brite
KEGG Orthology (KO) [BR:
seo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
seo03032
]
STM14_4628 (gyrB)
03400 DNA repair and recombination proteins [BR:
seo03400
]
STM14_4628 (gyrB)
Enzymes [BR:
seo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
STM14_4628 (gyrB)
DNA replication proteins [BR:
seo03032
]
Prokaryotic type
DNA Topoisomerases
STM14_4628 (gyrB)
DNA repair and recombination proteins [BR:
seo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
STM14_4628 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
GyrB_hook
Toprim
HATPase_c
HATPase_c_3
DUF6865
Motif
Other DBs
NCBI-ProteinID:
ACY91005
UniProt:
A0A0F6B903
LinkDB
All DBs
Position
complement(4052548..4054962)
Genome browser
AA seq
804 aa
AA seq
DB search
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKDIV
VTIHADNSVSVTDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSQKLELVIQRDGKIHRQIYEHGVPQAPLAVTGDTDKTGTMVRFWPSHETFTNVT
EFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNI
FYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE
GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLSEY
LLENPSDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKG
KQEQYIKDDEAMDQYQISIALDGATLHANAHAPALSGEALEKLVSEYNATQKMIGRMERR
FPKALLKELVYQPTLTEADLSDEQTVTRWVNALITELNEKEQHGSQWKFDVHTNTEQNLF
EPIVRVRTHGVDTDYPLDHEFVTGAEYRRICTLGEKLRGLIEEDAFIERGERRQPVTSFE
QALEWLVKESRRGLAIQRYKGLGEMNPDQLWETTMDPESRRMLRVTVKDAIAADQLFTTL
MGDAVEPRRAFIEENALKAANIDI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattcttatgactcctccagtatcaaagtcctgaaagggctggatgcggtgcgt
aagcgcccgggtatgtatatcggcgacacggatgacggcaccggtctgcaccacatggta
ttcgaggtggtagataacgctatcgacgaagcgctcgcaggtcactgtaaagatatcgtc
gtgactattcacgccgataactccgtgtccgtaacggatgatggccgtggcattccgacc
gggattcacccggaagaaggcgtctcggcggcggaagtgatcatgaccgttctgcacgcg
ggcggtaaatttgacgataactcctataaagtctccggcggtctgcacggcgtgggcgtc
tcggtagtcaacgctctgtcgcaaaaactggaactggttatccagcgagatggcaaaatt
caccgtcagatctacgagcacggcgtgccgcaggcacccctggccgtcactggcgatacc
gataaaaccggcacgatggtacgtttctggccgagccacgaaaccttcaccaacgtcact
gaatttgaatatgagatcctggcgaaacgcctgcgtgaactgtcattcctgaactcaggc
gtctccatccgcctgcgcgacaagcgcgatggcaaagaagatcatttccactacgaaggc
ggcatcaaggcgtttgttgaatatctgaacaagaataaaacgccgatccacccgaatatc
ttctatttctccaccgaaaaagacggtatcggcgtggaagtagcgctgcagtggaacgat
ggtttccaggaaaacatctactgctttaccaacaacattccgcagcgcgacggcggtact
caccttgcaggcttccgtgcggcgatgacccgtacgctgaacgcctacatggacaaagaa
ggctacagcaaaaaagccaaagtcagcgccaccggcgacgatgcccgtgaaggtctgatt
gcggtggtttccgtaaaagtaccggatccgaaattctcctcacagaccaaagataagctg
gtctcttccgaggtgaaatcggcggtagaacagcagatgaacgaactgctgagcgaatac
ctgctggaaaacccatctgacgcgaaaatcgtcgtcggcaaaattatcgacgccgcgcgt
gcgcgtgaagcggcgcgtcgcgcccgtgaaatgacccgtcgtaaaggcgcgctcgattta
gccggtctgccgggcaaactggcggactgtcaggaacgcgacccggcgctgtccgaactg
tacctggtggaaggggactccgcgggcggctctgcgaagcaggggcgtaaccgcaagaac
caggcgattctgccgctgaaaggtaaaatccttaacgtcgagaaagcgcgcttcgacaag
atgctttcctcccaggaagtggcgacgctgatcaccgcgctgggctgcggtatcggtcgc
gacgagtacaacccggacaagctgcgctatcacagcatcatcatcatgaccgatgcggac
gtcgacggctcgcacatccgtacgctgctgttgaccttcttctatcgtcagatgccggaa
attgtcgagcgtggccacgtctacattgcgcagccgccgctgtacaaagtgaagaaaggt
aagcaggaacagtacattaaagacgacgaagcgatggatcagtaccagatttccatcgcg
cttgacggtgcgactctgcacgcgaacgctcatgcgccggcgctatccggcgaagcgtta
gaaaaactggtctctgaatataacgccacgcagaaaatgattggtcgtatggagcgtcgc
ttcccgaaagcgctgctcaaagagctggtgtatcagccaactctgaccgaagccgatctt
tctgatgagcagactgtaacgcgctgggtgaatgcgctgattaccgagctgaacgagaaa
gagcagcacggcagtcagtggaagttcgatgttcatactaatacggaacagaatctgttc
gagccgatcgttcgcgtgcgtacgcatggcgtggataccgattatccgttggatcacgag
tttgtgaccggcgcggaatatcgtcgtatctgcacgctgggcgagaagctgcgtggtctg
attgaagaggacgcgtttatcgaacgcggcgagcgtcgccagccggtaaccagcttcgag
caggcgctggagtggctggtgaaagaatcacgtcgcggtctagctatccagcgttataaa
ggtctgggtgaaatgaacccggatcagctgtgggaaaccaccatggacccggaaagccgc
cgtatgctgcgcgtgaccgtcaaagatgcaattgctgccgaccagctgttcactacgctg
atgggtgatgccgttgagccgcgtcgtgcctttatcgaggagaacgccctgaaagcagcg
aatatcgatatttaa
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