Seohaeicola sp. tig00000074: ACMUJL_06120
Help
Entry
ACMUJL_06120 CDS
T11112
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
seoh Seohaeicola sp. tig00000074
Pathway
seoh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
seoh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACMUJL_06120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seoh03400
]
ACMUJL_06120
Enzymes [BR:
seoh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACMUJL_06120
DNA repair and recombination proteins [BR:
seoh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACMUJL_06120
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
HHH_5
AAA_11
Viral_helicase1
HHH_2
NAT10_TcmA_helicase
DEAD
NTPase_1
nSTAND3
AAA_28
PIF1
RsgA_GTPase
AAA_16
AAA_22
AAA_29
UvrD-helicase
AAA
NPHP3_N
SLFN-g3_helicase
NACHT
AAA_24
T2SSE
AAA_17
AAA_23
AAA_7
ABC_tran
CbiA
NB-ARC
SRP54
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
XOY37571
LinkDB
All DBs
Position
1203251..1205422
Genome browser
AA seq
723 aa
AA seq
DB search
MKSADDTQTEVLAGLVERVTFHNSENGFCVLRVKARGHRDLVTTVGHAAMISAGEWITAS
GVWLNDRNHGLQFKAHFLKTSAPSTVDGIEKYLGSGMIRGIGPVYAKRLVQAFGKDVFDI
IEAAPERLREVTGIGPMRAAKITAGWADQKVIREIMVFLHQHGVGTARAVRIFKTYGTDA
VQVMSENPYRLAKDIRGIGFRTADTIAEKLGIEKTAMIRVRAGVSFALTEAMGDGHCSLP
RAELIRLAGKLLEVPPPLIESALQEELAEETVTADRVGDADCIFLTGLYLAERGISEHMK
RIRAGALPWLEIDADKALPWIEQKTGLTLAASQAEAIRLALRSKLMVITGGPGVGKTTIV
NSILRILAAKAVKLLLCAPTGRAAKRMTEATGMEAKTINRLLEFDPKAFGFKRKEENPLD
CDLLVVDESSMVDVLLMQSLLKAVPSNAALLIVGDIDQLPSVGPGQVLADIIGSSAVPVV
RLTEVFRQAAQSKIITTAHAINAGHLPDLGKPDGEADFYFVPAADPEQAVPRIVELVAKR
IPQRFGFHLIKDIQVLCPMNRGGVGARSLNVELQAALNPAGEKKVERFGWTFAPGDKVMQ
IENDYDKDVYNGDIGMIEDVDLDDGEVAVNFDGRTVTFLFGELDTVVPAYAATIHKSQGS
EYPAVVIPVMTQHYAMLQRNLIYTGVTRGKKLVVLVGQKKAVAIAVKNVSGRRRWSKLDE
WLT
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccgccgatgacacacagaccgaagttctcgccggccttgtggagcgggtgacc
ttccacaattccgagaacgggttttgcgtgctgcgggtaaaggcacggggtcaccgggat
ctggtgactacagtgggccatgcggcgatgatttcggcgggggaatggattacggcctct
ggggtctggctgaacgatcgcaaccacggcctgcagttcaaggcgcatttcttgaagacc
tcggcaccatcgactgtcgacggcatcgagaaatacctcggctccggtatgatccgcggg
atcgggcctgtctatgcgaagcgcttggtgcaagccttcggcaaggatgtcttcgacatc
atcgaggccgcacctgaacggctgcgcgaagtcaccggcattggccccatgcgcgcagcc
aagatcacggccgggtgggcggatcagaaagtgatccgcgagattatggtcttcctgcac
cagcatggcgtgggcactgcgcgcgcggtgcggatcttcaagacttatggcacggatgcc
gtgcaggtgatgagcgaaaacccctaccgccttgccaaggacatccggggcataggcttc
cgcacggcggatacgatcgccgagaagctcggcatcgagaaaactgcgatgatccgtgtg
cgtgcaggagtttcctttgcgctgaccgaggcgatgggcgatggccattgcagcctccct
cgggccgagttgatcaggctggcgggcaagctccttgaggtccctcccccgctgattgag
agcgcgctgcaagaggaactggcggaagagactgtgacagccgaccgcgtgggcgacgcg
gactgcatcttcctgacggggctttatctcgcggaacgggggatctcagagcatatgaag
cgcattcgcgcgggcgcgctgccctggctggagattgacgctgacaaggcgctgccctgg
atcgagcagaagacgggcctgacgcttgctgccagccaggctgaagcgatccggctggcg
ctgcgctcgaagctcatggtgatcaccggcggccccggggttggcaagaccacgatcgtg
aattcgatcctgcgcatcctcgcagccaaggccgtgaagctgctcctctgcgcaccgacg
ggtcgcgcagccaagcgcatgaccgaggccaccgggatggaggccaagaccatcaaccgg
ctcctagagttcgatccgaaggccttcggcttcaagcgcaaggaggagaacccgctcgat
tgcgacctgctggtcgtggacgaaagctcgatggtcgatgtactgctgatgcagtcgctc
ctgaaggccgtgcccagcaatgcagcgctgctgatcgtcggggatatcgaccagctgccc
tctgttggccccggccaagtactggccgacatcatcggttctagcgccgtgcccgtggtg
cggctcaccgaagtgttccgtcaagcagcacagagcaagatcatcaccacggcgcatgcc
atcaatgcagggcacttgcccgatcttggcaagcccgatggcgaggcggatttctatttc
gtgccggccgcagatccggagcaggccgtgccgcgcatcgtcgagctggtggccaagcgc
atcccgcagcggttcggcttccatctgatcaaggacatccaggtcctttgcccaatgaac
cggggcggcgttggcgcgcggtcactcaacgtagaattgcaggctgctttgaaccctgcc
ggggagaagaaggttgagcgctttggctggaccttcgctccgggcgacaaggtcatgcag
atcgagaacgattacgataaggacgtctataacggcgacatcggcatgatcgaggatgtc
gatcttgacgatggcgaggtagccgtgaacttcgacggccgtaccgtgactttcctcttc
ggcgaactcgacacggtggtcccggcctatgcggccacgatccacaagagccagggttcc
gagtaccctgccgtagtcatccccgtcatgacccagcactacgccatgctgcagcgcaac
ctgatctatactggcgtcacgcggggcaagaagctcgtcgtgctcgtcggtcagaagaag
gccgtggcgatcgcggtgaagaacgtatcgggccggcggcgctggtctaagctggatgaa
tggctgacatga
DBGET
integrated database retrieval system
