Seohaeicola sp. tig00000074: ACMUJL_07780
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Entry
ACMUJL_07780 CDS
T11112
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
seoh Seohaeicola sp. tig00000074
Brite
KEGG Orthology (KO) [BR:
seoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
seoh03032
]
ACMUJL_07780 (ihfB)
03036 Chromosome and associated proteins [BR:
seoh03036
]
ACMUJL_07780 (ihfB)
03400 DNA repair and recombination proteins [BR:
seoh03400
]
ACMUJL_07780 (ihfB)
DNA replication proteins [BR:
seoh03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ACMUJL_07780 (ihfB)
Chromosome and associated proteins [BR:
seoh03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
ACMUJL_07780 (ihfB)
DNA repair and recombination proteins [BR:
seoh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
ACMUJL_07780 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
Flp1_like
Tim44
XPC-binding
HU-CCDC81_bac_2
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
XOY37880
LinkDB
All DBs
Position
complement(1541159..1541440)
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AA seq
93 aa
AA seq
DB search
MIRSELIQKIAEENPHLFQRDVEKIVNTIFEEITNAMARGDRVELRGFGAFSVKKREARI
GRNPRTGETVPVEEKYVPFFKTGKLLRDRLNGK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgatcagatcggaactgattcagaagattgccgaggaaaacccccatcttttccagcgg
gacgtggaaaagatcgtcaacacgatcttcgaagagatcaccaatgccatggcgcgcggt
gatcgcgtggagttgcgcggcttcggcgccttctccgtcaagaagcgcgaggcccggatc
gggcgcaacccgcgcaccggcgaaactgtccccgtcgaggaaaaatacgtgcccttcttc
aagaccggtaaactgctgcgtgaccgtctgaacggaaagtga
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