Seohaeicola sp. tig00000074: ACMUJL_08220
Help
Entry
ACMUJL_08220 CDS
T11112
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
seoh Seohaeicola sp. tig00000074
Pathway
seoh00521
Streptomycin biosynthesis
seoh00523
Polyketide sugar unit biosynthesis
seoh00525
Acarbose and validamycin biosynthesis
seoh00541
Biosynthesis of various nucleotide sugars
seoh01100
Metabolic pathways
seoh01110
Biosynthesis of secondary metabolites
seoh01250
Biosynthesis of nucleotide sugars
Module
seoh_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
seoh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
ACMUJL_08220 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
ACMUJL_08220 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
ACMUJL_08220 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
ACMUJL_08220 (rfbB)
00525 Acarbose and validamycin biosynthesis
ACMUJL_08220 (rfbB)
Enzymes [BR:
seoh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
ACMUJL_08220 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
adh_short_C2
Sacchrp_dh_NADP
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-ProteinID:
XOY37964
LinkDB
All DBs
Position
complement(1614460..1615509)
Genome browser
AA seq
349 aa
AA seq
DB search
MRLLVTGGAGFIGSAVVRLAMSRGHEVINLDALTYAACLENVASVADDPRYAFEQADIRD
RAALDRIFAAHKPDAVMHLAAESHVDRSIDGPGDFIETNITGTYNMLEAARAYWTTQGKP
AGFRFHHISTDEVFGSLPADPAVKFTEDTPYDPRSPYSASKAASDHLVRAWAETYGLPVV
LTNCSNNYGPFHFPEKLVPVIILNALAGKPLPIYGDGSNIRDWLFVEDHADALLLVLEKG
ALGCSYNIGGENERTNLELVRTLCAILDDLRPKAAGSYADQITFVTDRPGHDARYAIDPS
RIRAELGWRPSVTVEEGLRRTVQWYLDNEAWWRPLQERHGVGQRLGTKA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgagacttcttgtaaccggcggggccggcttcatcggatccgcggtggtgcgccttgcc
atgtcgcgcgggcatgaggtgatcaacctcgatgcgctgacctatgccgcctgcctggaa
aacgtggcatccgtggcggatgatccgcgctatgcgttcgagcaggccgacattcgtgat
cgcgccgcactggaccggatctttgccgcccacaaacccgatgcggtgatgcatctggcg
gccgaaagccatgtggaccggtcgatcgacggacccggcgatttcatcgagacgaacatc
accggcacctacaacatgctggaagcggcgcgcgcctactggacgacgcagggaaaaccc
gccgggttccgattccaccacatctcgaccgacgaggtcttcggctcgctgcccgccgat
ccggcggtgaaattcaccgaagacacgccctatgacccgcgttcgccctattccgcctcc
aaggcggccagcgaccatctggtgcgggcctgggccgaaacctacggcctgcccgtggtg
ctgaccaattgttccaacaattacggccccttccatttccccgagaaactggtgccggtg
atcatcctgaacgcgctggcgggcaagccgctgccgatctacggcgatggctcgaacatc
cgggattggctgttcgtcgaggatcacgccgatgccctgctgctggtgctggaaaagggc
gcgctgggctgcagctacaacatcggcggcgagaacgaacgcaccaatctcgaactcgtc
cgcacgctctgcgccatcctggacgatctgcgtcccaaggcggcgggctcctatgccgat
cagatcaccttcgtgaccgaccgccccggccatgacgcgcgctatgccattgatccgtcg
cgcatccgcgccgaactgggctggcggccctccgtcaccgtcgaggaaggcctgcgccgc
accgtgcaatggtatctggataacgaggcatggtggcgcccgctgcaggaacgccacggc
gtcggtcagcgattggggaccaaggcatga
DBGET
integrated database retrieval system