Seonamhaeicola sp. S2-3: BWZ22_04820
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Entry
BWZ22_04820 CDS
T04683
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
seon
Seonamhaeicola sp. S2-3
Pathway
seon03030
DNA replication
seon03430
Mismatch repair
seon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
seon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BWZ22_04820
03430 Mismatch repair
BWZ22_04820
03440 Homologous recombination
BWZ22_04820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
seon03032
]
BWZ22_04820
03400 DNA repair and recombination proteins [BR:
seon03400
]
BWZ22_04820
Enzymes [BR:
seon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BWZ22_04820
DNA replication proteins [BR:
seon03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BWZ22_04820
DNA repair and recombination proteins [BR:
seon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BWZ22_04820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
APY10600
LinkDB
All DBs
Position
complement(1021468..1025850)
Genome browser
AA seq
1460 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPITDVDNWPRCIQIAWQLHDDMGNCIEHQDYLVKPDGFNIPY
DAEKVHGISTELAQEQGVPLNEVLEKFNAVLQKSKFIVGQNVKFDLNIMGAEFVRANIAN
NLQELPVLDTCTEHTAQLCKIPGGRGGRFKLPTLTELHEHLFNTPFAEAHNATADVEATT
RCFLELVRLGEYTKEELDVEDDYQVRFKEANPSTIQLIGLKHVNLKQESAKIRKRLQKLE
EAKTTDNDTVKDVDLTGVDFVHLHNHSQFSVLQSTMSIADVVSAAASHNMPAVALTDHGN
MMGAFHFINAVNKQNSSIKAAIEAAEEKGETTNKKLIKPIIGCEFFVCENHKDKSRKDNG
YQIVLLAKNKNGYHNLAKLSSHAFVDGFYYVPRIDKDLIRQYKEDIIVLTGNLYGEVPSK
VLNIGENQAEEALIWWKNEFGDDLYIELMRHNQEDENRVNDTLVKLARKHDVKLVATNNT
YYQKQEDANAHDILLCVKDGEKQATPIGRGRGYRYGLPNQEYYFKSSEEMKQLFKDLPEA
ILNTQEVANKIEAFQLARDVLLPAFDIPDEFKHEEDLVDGGKRGENAYLRHLTYEGAKKR
YGEPLSDEVKERLDFELNVIEKTGYPGYFLIVEDFIREARNMDVSVGPGRGSAAGSVVAY
CLWITNIDPMKYDLLFERFLNPDRISMPDIDIDFDDEGRSRVMDYVIKKYGANQVAQIIT
YGTMAAKSSIRDTARVLDLPLFDADRIAKLIPNMSKLNKIFGLDEKALASKFRAEELEKV
NELLNISEGNDLEAKTVNTARTLEGSVRNTGIHACGVIITPDDITKFVPVSVAKDSDLYV
TQFDNSVVESAGLLKMDFLGLKTLTLIKDTVKIVKAKHGIELDPESFPLDDEETYALFQR
GETVGVFQYESPGMQKHLRELKPTVFEDLIAMNALYRPGPMEYIPSFTRRKHGEEEIDYD
LPAMEEYLKETYGITVYQEQVMLLSQKLANFSKGEADMLRKAMGKKQIAVLDKMKPKFIE
QASANGHDAKVLEKIWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAAVLSN
NMNDIKQVTFFMEECKRMKLKVLGPDVNESYYKFSVNKEGAVRFGMGAIKGVGHGAVMTI
VENRKEDGPYKSIFDFAKRIDLRAANKKAFENLALAGGFDCFTDTHRAQYFHKEGDLTFL
EMVIKYAQKHKENENSAQVSLFGEASEVQIAEPTIPPCEEWGTMEKLAKEKDVVGIYISG
HPLDDFKIEMKTFCNATVAMFNDLQPYVNRELVFGGVVTDVQHRVSKQGKGWGMFTIEDY
TDSFEFRIFGEDYLKFRHFLMVNNFVFVKAFIREGWVNKDTGKKSDPRIQFNSFQLLHDV
MENYAKKLSLLFDINDLKESKITQIQSLLSMHPGNHALNFVVYDAKEKIKLSMPSRKQKV
KVCQELISELESQHIHYKLN
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaatctttgatactgaaactaccggattgccaaaacgttgggatgctcccata
accgatgttgataattggccaaggtgtattcaaattgcatggcaactccatgatgatatg
gggaattgtatagagcatcaagattatttggtaaaaccagatggttttaacattccgtat
gatgctgaaaaggttcatggtatttctaccgagttagcacaagaacaaggcgtgccttta
aatgaagtattagaaaaatttaatgctgttttacaaaaatcaaagtttattgttgggcaa
aatgtaaagtttgatttgaatattatgggagccgaatttgttcgagctaatatagcgaat
aacttgcaagagctccctgttttagatacttgtacagaacatacagcacagttatgtaaa
attccgggagggcgcggtggtcgctttaaattaccaacattaacagagttacatgagcat
ttatttaatactccgtttgccgaagcacataatgcaacagccgatgttgaggctacaaca
cgttgttttttagaattagtgcgcttaggtgaatatactaaagaggagctagatgtagag
gatgattaccaagtaaggtttaaagaggctaaccccagcaccattcagcttataggttta
aaacatgttaaccttaagcaagaaagcgctaaaattagaaaacgtcttcaaaaactagaa
gaagccaaaactacagataatgatacagtaaaagatgtagatttaacaggtgtagatttt
gtacatcttcataatcattcgcagttctcggtattacaatctactatgagtattgccgat
gtggtttctgcggcagcgtctcataacatgcctgctgtagccttgacagatcatggtaat
atgatgggagccttccattttataaatgcagttaacaagcaaaatagtagcattaaagcg
gctatagaagcagccgaagaaaaaggagaaaccaccaataaaaagttaataaaacctatt
attggttgtgagttttttgtttgtgaaaatcataaagataaaagccgtaaagataatggt
taccaaattgtactgttagctaaaaacaaaaacggataccataatttggcaaaattatca
tctcatgcctttgtagatggcttttattatgtgccaagaattgataaagatcttataaga
cagtataaagaagatattattgttttaacaggaaacctttacggtgaagtgccaagtaag
gtattgaatattggcgaaaaccaagcagaagaggctttaatttggtggaaaaatgagttt
ggagatgatttgtacattgagttaatgcgccataaccaagaagatgaaaaccgcgtaaac
gacaccttggttaaattggctagaaaacatgatgtaaaacttgtagctaccaataacact
tactatcaaaaacaagaagatgccaatgcgcatgatattttattatgtgtaaaagatgga
gaaaagcaagctactccaataggtagagggcgtgggtatcgttacggtttaccaaatcag
gagtactattttaagtcttcagaagagatgaaacaactctttaaagatttgccagaagcc
attttaaatactcaagaagtagccaataaaatagaagcctttcaattagctcgtgatgta
ctattgcctgcatttgatatacccgatgaatttaaacatgaagaagatttagttgatggt
ggtaagcgtggtgaaaatgcctatttacgtcatttaacttatgaaggagctaaaaaacgc
tatggtgaacccctttctgatgaagtaaaagaacgtttagattttgagttgaatgttatt
gaaaagacaggatatccaggatatttcttaattgttgaagattttattcgtgaagcccga
aacatggatgtatcggtgggtccaggacgtggttcggcagcaggttcggtagtagcttat
tgcttatggattaccaatatagaccccatgaagtacgacttactttttgagcgtttctta
aatccagatcgtattagtatgcccgatattgatattgattttgatgatgaaggccgaagt
agggttatggactatgttattaaaaaatacggtgctaaccaagtggctcaaattattact
tacggtactatggcagcaaaatcatctattcgtgatacggccagagtattagatttaccg
ttgtttgatgctgatagaattgcaaaactaattcccaatatgtctaaactaaataaaatt
tttggtttagatgaaaaagctttagcaagtaagtttagagcagaggagttagaaaaagta
aatgagcttttaaatatttcagaaggaaacgatttagaagctaaaaccgtgaatacggct
agaactctagaaggttctgtaagaaatacaggaattcacgcttgtggagttattatcacg
ccagatgatatcactaagtttgtaccagtttctgtagcaaaagattccgatttatatgtt
acccagtttgataactcggtggtggaatctgcgggactgttaaaaatggatttcttaggc
ttaaaaaccttaaccttaataaaagataccgtaaaaattgtaaaagcaaaacacggtatt
gagttagatcctgaaagttttccgttagatgatgaagaaacttatgcgctatttcaacga
ggtgaaaccgtaggggtgtttcaatatgaatctcctggaatgcaaaaacaccttcgtgag
ctaaagccaacagtgtttgaggatttaattgccatgaatgccttataccgtccaggacca
atggagtacattccaagttttactagacgtaaacatggtgaagaagaaattgattatgat
ttacctgccatggaagaatacctaaaggaaacttatggtattaccgtttatcaagagcag
gtaatgttgttgtctcaaaagttagcaaatttctctaaaggtgaagccgatatgcttcgt
aaagccatggggaaaaagcaaattgcggttctagataaaatgaagcctaagtttatagaa
caagcaagtgctaatggtcatgatgctaaagttttagaaaagatttggaaagattgggag
gcatttgcaagttatgcgtttaataaatcgcactctacttgttatgcgtggatagcctat
caaacggcttacttaaaggcgcattatcctgcagaatatatggctgcagtactgtctaat
aacatgaacgatattaagcaagtaaccttcttcatggaagaatgtaaacgcatgaaatta
aaggtacttggaccagatgttaatgaaagttactataagttttcagtaaataaagaagga
gcagtacgttttggtatgggggctataaaaggtgttggtcatggtgcggttatgactatt
gttgaaaacagaaaagaagacggtccatataagtctattttcgattttgctaaacgaatt
gatttaagagcagccaataaaaaagcctttgaaaatttagctttagccggagggtttgat
tgttttacagacactcatagggcacaatactttcataaagaaggcgatttaaccttttta
gaaatggttataaaatatgctcaaaaacataaagaaaatgagaattctgcacaggtaagt
ttatttggtgaagctagtgaggttcagattgcagaacctaccattccgccttgcgaagaa
tggggaaccatggaaaaattagctaaagaaaaagacgttgttggtatctacatttctggt
cacccgctagacgatttcaaaatagaaatgaaaactttttgtaacgctactgtagcaatg
tttaatgacttacaaccttatgtaaatagagaattggtgtttggtggtgtggtaacagat
gttcaacatcgtgttagtaagcaaggtaaaggctgggggatgtttactatagaagactat
acagatagttttgaatttagaatttttggcgaagattatttaaaattcagacacttttta
atggtaaataactttgtgtttgtaaaagcttttataagagaaggttgggttaataaagat
acaggaaaaaagagtgacccgcgtatacaatttaatagttttcagttgttgcatgatgtt
atggagaattatgctaaaaaactatcgcttctatttgatataaacgatttaaaagaaagt
aaaataacccaaatacaaagtttgttaagtatgcatccaggtaatcatgctttaaatttt
gtggtgtatgatgctaaagaaaaaataaagttgagtatgccaagtagaaaacaaaaagta
aaagtttgccaagaattaatttcagaactagaatctcaacatattcattacaaattaaat
taa
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