Seonamhaeicola sp. S2-3: BWZ22_06480
Help
Entry
BWZ22_06480 CDS
T04683
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
seon
Seonamhaeicola sp. S2-3
Pathway
seon03410
Base excision repair
seon03430
Mismatch repair
seon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
seon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BWZ22_06480
03430 Mismatch repair
BWZ22_06480
03440 Homologous recombination
BWZ22_06480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seon03400
]
BWZ22_06480
DNA repair and recombination proteins [BR:
seon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BWZ22_06480
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BWZ22_06480
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BWZ22_06480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
DSPc
pPIWI_RE_Y
Motif
Other DBs
NCBI-ProteinID:
APY10905
LinkDB
All DBs
Position
complement(1391538..1393229)
Genome browser
AA seq
563 aa
AA seq
DB search
MRWTLKPKPNQEKVEALQKALQVSEPIATLLVQRGIETYDQAKAFFRPSLNDLHNPYLMK
DMDKAVERIEKAIANKENILVYGDYDVDGTTAVALMSSYLKTKHALVYTYVPNRYDEGYG
VSKKGINFALENDFSLIIALDCGVKAVEKVAYAKSLGIDFIICDHHRPGAEIPKAVAVLD
PKREDCEYPYKELCGCGVGFKLIQALAQKDGYTIEDLIPYLDLVATAIGADIVPINGENR
VLAHYGLKVINSNPRPGIKAILDQVEKTELTITDVVFIVAPRINAAGRMKHGNYAVALLA
EEESEKANKFAAEINEYNLDRRETDKDITEAALKQIEEQKEQDRFTTVVYNETWHKGVIG
IVASRLTETYYRPTLVFTKSGDKLAASARSVRDFDVYEAIAACSEYVEQFGGHKYAAGLT
LKEENYEAFKQAFEDFVSKTIDKNLLIPEIKADIKIDLKDITPKFYRILKQFAPYGPENM
TPIFMTEDLADTGHGKCVGQDKTHLRVTVSQPNSNTFVGIGFGMGDKFNIISDKKPFKAV
YSIDENEWQGNVSLQLKLRDIKP
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgcgctggacgcttaagccaaaaccaaatcaagaaaaagttgaagctttacaaaaagct
ttacaagttagtgagcctattgcaactttattggtacaacgtggtattgaaacctatgac
caagcaaaggcgttttttagacccagcttaaatgatttacacaacccatatctcatgaaa
gatatggataaggctgttgaacgtattgaaaaagccattgccaataaagaaaatattttg
gtttatggcgattatgatgtagatggaactacggccgtggctttaatgtcatcttaccta
aaaacgaaacacgcattggtttatacctatgtacctaataggtatgatgaaggttatggc
gtgtctaaaaaaggcatcaactttgctttagagaatgatttttcactcataatagcttta
gattgcggcgttaaagctgttgaaaaagtagcctatgcaaaatctttaggtattgatttc
attatatgtgatcatcatagaccaggagcagaaatacccaaagcagttgccgttttagac
cccaaacgtgaagattgcgaatacccatataaagaattatgtggttgtggcgtggggttt
aaactcattcaagctttagctcaaaaagatggatatactattgaagatttaataccgtac
ttagatttagtagccacagcaataggtgcagatattgttcctataaatggcgaaaacaga
gtgttggctcattatggtttaaaagttataaactcaaaccccagacctggtattaaagct
atactagatcaggttgaaaaaacagaacttaccataacagatgtggtgtttattgtagcc
ccaagaataaatgctgcaggacgtatgaaacacggtaattatgcagtagcattgttagcc
gaagaggaatcagaaaaagcaaataagtttgccgcagaaattaacgagtataatttagat
agacgagaaacagataaagacattacagaggcagcgcttaaacaaattgaagaacaaaaa
gaacaagaccgctttacaactgttgtttataacgaaacttggcataaaggcgttattggt
attgtagcttctagattaacagaaacctattacaggccaacactagtatttaccaaaagt
ggtgataaattagcagcttcggcacgctctgttagagattttgatgtttacgaagctatt
gctgcttgtagtgaatatgttgaacaatttggaggacataaatacgcagcaggtttaacg
cttaaagaagaaaattacgaagcttttaaacaggcttttgaagattttgtttcaaaaact
attgataaaaacttgctcattccagaaataaaagcagatattaaaattgatttaaaagat
attacccctaaattctatagaattttaaaacaatttgcaccctacggacccgaaaatatg
actcccatttttatgaccgaagatttagcagatactggccatggtaaatgtgtagggcaa
gataaaacacatttaagggttacggtttctcaacccaactcaaacacttttgttggaatt
ggttttggaatgggtgataaattcaatattatttcagataaaaaaccttttaaagcagtg
tattctattgatgaaaatgaatggcaaggaaacgtatcacttcaacttaaattaagagat
ataaaaccataa
DBGET
integrated database retrieval system
