Staphylococcus epidermidis ATCC 12228: SE_0608
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Entry
SE_0608 CDS
T00110
Name
(GenBank) aminotransferase NifS-like protein
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
sep
Staphylococcus epidermidis ATCC 12228
Pathway
sep00450
Selenocompound metabolism
sep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sep00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SE_0608
Enzymes [BR:
sep01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
SE_0608
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
SE_0608
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Pyridoxal_deC
SelA
DUF5779
Motif
Other DBs
NCBI-ProteinID:
AAO04205
UniProt:
Q8CTA4
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All DBs
Position
595110..596351
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AA seq
413 aa
AA seq
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MAEHSFDVKAVIKDFPILEQKVNNKRLAYLDSTATSQTPVQVLNVLDDYYKRYNSNVHRG
VHTLGSLATDGYENARETVRRFINAKYFEEIIFTRGTTASINIVAHSYGDANISEGDEIV
VTEMEHHANIVPWQQLAKRKNATLKFIPMTKDGELQLDDIKATINDKTKIVAIAHVSNVL
GTINDVKTIAKIAHEHGAVISVDGAQSAPHMALDMQDIDADFYSFSGHKMLGPTGIGVLY
GKRELLQNMEPVEFGGDMIDFVSKYDSTWADLPTKFEAGTPLIAQAIGLAEAIHYIENLG
FNAIHQHEKELTEYAYEQMLTIDGLEIYGPPKDRRAGVITFNLADIHPHDVATAVDTEGV
AVRAGHHCAQPLMKWLGVSSTARASFYVYNTKEDVDQLVQALKQTKEFFSYEF
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacattcttttgatgtcaaggcagtcattaaagactttccgatacttgagcaa
aaggtaaataataaacgtttagcataccttgattcaactgcgactagccaaacacctgta
caagttttaaatgtactagatgattactacaaacgctataattctaatgtccatcgtggt
gtacacacattagggtctttagctacagatggctatgaaaatgcaagagaaacagtaaga
cgttttatcaatgcgaagtactttgaagaaattattttcactcgaggaacaactgcatca
ataaatatagtagcacatagttatggtgacgctaatattagtgagggtgacgaaattgtt
gtaacagaaatggaacatcatgctaatattgttccatggcaacaattagctaaacgtaaa
aatgcaacactaaaatttattccaatgacaaaagatggtgaattgcaattagatgatata
aaagcaaccatcaatgataaaactaaaattgttgctatcgcacacgtttccaatgtttta
ggaacaattaatgatgttaaaactatcgctaaaattgcacatgaacatggtgcagttata
agtgtggatggtgcgcaatcagctccacacatggctttagatatgcaagatatcgatgct
gatttttatagttttagtggacataaaatgttaggtcctactggcattggagttttatat
ggaaaaagagaattattacaaaatatggaacccgttgaatttggtggagatatgatagac
ttcgtaagtaaatatgactccacttgggctgacctaccaactaaatttgaggctggcaca
ccacttattgctcaagcaataggtttagcagaagctatacattatattgaaaatttaggt
tttaatgcgattcatcagcatgaaaaagaattgacagaatatgcatatgaacaaatgtta
actatagatggtcttgaaatttacggtccaccaaaagatagacgtgcaggggtcattact
tttaatttagcagatatacatccacatgatgtagctacagctgttgatacagaaggtgtt
gcagttcgtgcaggccatcactgtgcgcaacctttgatgaaatggttaggtgtctcttca
acagcacgtgcaagtttttacgtttataatacgaaagaagatgtagatcaattagttcaa
gcattgaaacaaacgaaggagtttttctcttatgaattttaa
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