Staphylococcus epidermidis ATCC 12228: SE_0939
Help
Entry
SE_0939 CDS
T00110
Name
(GenBank) proline-tRNA ligase
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
sep
Staphylococcus epidermidis ATCC 12228
Pathway
sep00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sep00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SE_0939
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sep01007
]
SE_0939
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sep03016
]
SE_0939
Enzymes [BR:
sep01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
SE_0939
Amino acid related enzymes [BR:
sep01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
SE_0939
Transfer RNA biogenesis [BR:
sep03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SE_0939
Prokaryotic type
SE_0939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
tRNA_edit
HGTP_anticodon
Motif
Other DBs
NCBI-ProteinID:
AAO04536
UniProt:
Q8CST7
LinkDB
All DBs
Position
940457..942160
Genome browser
AA seq
567 aa
AA seq
DB search
MKQSKVFIPTMREVPAEAEALSHRLLLKAGLIKQSTSGIYSYLPLATRVLNNISKIIREE
MESIDAVEILMPALQQAELWEESGRWSAYGPELMRLKDRNGREFALGPTHEEVVTSLVRD
ELKSYKQLPLTLFQIQSKYRDEKRPRFGLLRGREFLMKDAYSFHSDEASLDATYQDMYQA
YSRIFKRVGINARPVVADSGAIGGSHTHEFMALSEIGEDTIVYSNESDYAANIEKAEVVY
HPSHKHSALAELTKVETPNVKTAQEVAEYLKRPLDEIVKTMIFKIDGEFIMFLVRGHHEL
NEVKLKSYFGTEHVEMATPDEIVNLVDANPGSLGPIFDKDIKIYADNYLQDLNNFVVGAN
EDHYHYINVNIGRDFDVTEYGDFRFITQGEMLSDGSGVAQFAEGIEVGQVFKLGTKYSES
MNATFLDNQGKAQPLIMGCYGIGVSRTLSAIVEQNNDENGIIWPKSVTPFDIHLITINPK
KDDQRTLGDQLYQKLMDSYDVLYDDRKERAGVKFNDSDLIGLPVRVVVGKRAEEGIVEVK
QRINGLSEEVQIDELEYYLQELFKNIK
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaatctaaagtatttataccaacgatgagagaagtccctgcagaggcggaagca
ttaagccatcgtttattattaaaagcagggttaattaaacagagtacaagtggtatatat
agttacttaccacttgctacacgtgtactaaataatatatctaaaatcatacgtgaagaa
atggaaagtatagatgctgtagaaattcttatgccagctttacaacaagcagaattatgg
gaagagtcaggacgttggagtgcatatggtccagaactaatgcgtttaaaagacagaaac
ggacgtgaatttgcattaggacctactcatgaggaagtagtcacttctttagtaagagat
gaattaaaatcatataaacagttaccccttactttatttcaaattcaatccaaatataga
gatgagaaaagaccacgctttggattattaagaggacgcgaatttcttatgaaagatgca
tattccttccattcagatgaagcttcattagatgcaacttatcaagatatgtatcaagca
tatagtcgcatattcaaacgtgtaggcatcaatgcaagaccggttgtggcagattcaggt
gcaatagggggaagtcatacacacgagtttatggcattgagtgaaattggggaagataca
atagtttatagtaatgagagtgactatgcagcgaatattgaaaaggctgaagttgtttat
catccttctcataagcattctgcacttgcggaattgactaaagttgagacgcccaatgtt
aaaacagctcaagaagttgcagaatatttaaagagaccattagatgaaattgtaaaaact
atgatctttaaaatagatggcgaatttattatgtttctagttcgtggacatcatgaatta
aatgaagtgaaattaaaatcatatttcggcacggaacatgttgaaatggctactccagat
gaaattgttaatcttgtagatgccaatccggggtctcttggtcctatttttgataaagat
attaaaatttatgccgataattacttacaagatttaaataactttgttgtaggagctaat
gaagatcattatcactatataaatgtcaatattggtagagactttgatgtaacagaatac
ggtgactttagattcattacacaaggtgagatgttaagtgatggctcgggagtagcacaa
tttgctgaaggcattgaagtaggacaagttttcaaattagggacaaaatattctgaatca
atgaatgcaacttttctagataatcagggaaaagctcaaccactcattatgggctgttat
ggtattggagtatcaagaacattaagtgcaattgttgaacaaaacaatgacgagaatgga
attatttggccaaaatcagtaacgcctttcgatatccatctaattactatcaatcctaaa
aaggatgatcaacgtactttaggtgatcaactttatcaaaaattaatggattcatacgat
gttttatatgatgaccgaaaagaacgtgctggtgttaaatttaatgattcagacctaatt
gggttaccggtacgagttgttgttggtaaaagagctgaagaaggtattgttgaggtaaaa
caacgcattaacggtttaagtgaagaagtgcaaattgatgaattagagtattacttacaa
gaattatttaagaatattaagtaa
DBGET
integrated database retrieval system
