Staphylococcus epidermidis ATCC 12228: SE_1028
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Entry
SE_1028 CDS
T00110
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sep
Staphylococcus epidermidis ATCC 12228
Brite
KEGG Orthology (KO) [BR:
sep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sep03400
]
SE_1028
DNA repair and recombination proteins [BR:
sep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SE_1028
Archaeal homologous recombinant proteins
SE_1028
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Epimerase_2
ERAP1_C
Motif
Other DBs
NCBI-ProteinID:
AAO04625
UniProt:
Q8CPC6
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All DBs
Position
1031283..1032407
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AA seq
374 aa
AA seq
DB search
MKIVHTADWHLGKILNGKQLLEDQKYILTQFKQHMEKEQPDLIVIAGDLYDTSYPSKEAI
GLLEETIEYLNIELKIPIIMISGNHDGRERLNYGSKWFENNQLYIRTQLENIDDPIELSG
VQFFTLPFATVSEVQNYFKDKQIETYQQALNECLEQMSSSIDNNKVNILIGHLTIEGGKT
SDSERPLTIGTVESVDMHSFRLFDYVMLGHLHHPFSINNSFIKYSGSILQYSFSEVNQSK
GYRVLDIENNQLLNETFVPLKPLRELEVIEGDYEDIIQERIKVKNKNNYFHFKLTNVSHI
TDPMMKLKQIYPNILALSNVVFDHSENFSHVEIKKQDDQTIIENFYKNMTDQHLSQVQSD
KIKHLLSFILDREG
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgtacataccgctgattggcatctgggtaaaattttaaatggaaaacaattg
cttgaagatcaaaaatatattttaactcagtttaaacaacatatggagaaagaacagcca
gatttaatagtaattgcaggtgatttgtatgatacctcatatccaagtaaagaagcgata
ggtttacttgaagagactattgaatacctaaatatagaacttaaaattccaataatcatg
ataagcggtaaccatgatggtagggaaagattgaattatggctctaaatggtttgagaat
aatcaactttacataagaactcaactagaaaatattgatgatccaatagaattgagtggt
gttcaatttttcactttacctttcgcaactgtgagtgaagtacaaaattattttaaagat
aagcaaatagaaacatatcaacaagcattaaacgaatgcttagagcaaatgtctagttcc
atagataataataaggtgaatatattaattggtcatttaactattgagggcggtaaaact
tcagattcagaaagaccattaactattggaacagtagaatcagttgatatgcattctttt
cggttgtttgattatgtaatgctcgggcacctacatcatccatttagtataaataactct
tttatcaaatatagcggttcgattttgcaatactctttctctgaagtaaatcaatctaaa
ggatatagagttcttgatattgaaaacaaccaactattaaatgaaaccttcgttccttta
aaacctctaagagaactagaagttattgaaggtgattatgaggatattattcaagaaaga
attaaagtaaaaaataaaaataattattttcattttaagttaacgaatgtttctcatatt
actgatccaatgatgaaactgaaacaaatttatcccaatatattagcactatcgaatgta
gtatttgatcatagtgagaattttagccatgttgaaatcaaaaaacaagatgatcagaca
attatagaaaatttttataaaaatatgacagatcaacatctgagtcaagttcaatcagac
aaaataaagcacttgttaagttttatattggatagggaggggtaa
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