Staphylococcus epidermidis ATCC 12228: SE_1244
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Entry
SE_1244 CDS
T00110
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
sep
Staphylococcus epidermidis ATCC 12228
Pathway
sep03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SE_1244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sep03400
]
SE_1244
Enzymes [BR:
sep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
SE_1244
DNA repair and recombination proteins [BR:
sep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SE_1244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
DASH_Dad1
BAR_3_WASP_bdg
Motif
Other DBs
NCBI-ProteinID:
AAO04843
UniProt:
Q8CP25
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All DBs
Position
complement(1273533..1274423)
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AA seq
296 aa
AA seq
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MLIGSHVSMSGKKMLQGSAEEAHKYGESTFMIYTGAPQNTRRKNIEDLNIEKGQQAMKTY
GLSNIVVHAPYIINIANTTKPEVFNLGVDFLQKEIERTQALGAKDIVLHPGAHVGAGVDK
GIQKIIEGLNEVLTHDNDVRIALETMAGKGTEVGRSFEEIAQIIDGVTHNDRLSVCFDTC
HTHDAGYNVKEDFDGVLEKFDSIIGVDRIKVVHVNDSKNLRGAQKDRHENIGFGHIGFDA
LNYVVHHDTFKNIPKILETPYVGEDKKNKKPPYKLEIDMLKSQKFDPELKNKILTQ
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgttaataggatcacatgtttcaatgagtggcaaaaaaatgctgcaagggtcagcagaa
gaagcacataaatatggtgaatctacatttatgatttatacaggtgcgcctcaaaataca
agacgtaaaaatattgaagatttaaatatcgaaaaaggccagcaggcaatgaaaacatat
ggcttatcaaatatcgttgtacatgcaccatatatcattaacattgcaaatacaaccaaa
cctgaagtatttaatttaggagtcgactttctacaaaaagaaatcgaaagaactcaagcg
ctcggagcgaaagatattgtactgcatcctggagcgcatgtcggagcaggtgtagataaa
ggaattcaaaaaattattgaaggacttaatgaagtactcacacatgataatgatgtaaga
atagcacttgaaactatggcgggtaaaggaacagaagtagggagatcttttgaagaaatt
gctcaaataattgatggtgttacacataatgatcgcttatcagtatgttttgatacgtgc
cacactcatgatgccggttataacgtcaaagaagatttcgatggtgtactagaaaaattc
gacagcataattggagtagatcgaattaaagtagtacatgttaatgacagtaaaaaccta
agaggtgcacagaaggatcgtcacgaaaatatcggctttggtcatattggctttgatgca
cttaattacgtagtacatcatgatacttttaaaaatattcccaaaatattagaaactcca
tatgttggtgaagataaaaaaaataaaaaaccaccgtataaattagaaatagacatgtta
aaatcacaaaaatttgatccagaactcaaaaacaaaattttaactcaataa
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