Staphylococcus epidermidis ATCC 12228: SE_1263
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Entry
SE_1263 CDS
T00110
Name
(GenBank) conserved hypothetical protein
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
sep
Staphylococcus epidermidis ATCC 12228
Brite
KEGG Orthology (KO) [BR:
sep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sep03016
]
SE_1263
Enzymes [BR:
sep01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
SE_1263
Transfer RNA biogenesis [BR:
sep03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
SE_1263
Prokaryotic type
Methylthiotransferases
SE_1263
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
AAO04862
UniProt:
A0A0H2VGH3
LinkDB
All DBs
Position
complement(1292114..1293460)
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AA seq
448 aa
AA seq
DB search
MSTVAFHTLGCKVNHYETEAIWQLFKDANYERVEFETNADVFVINTCTVTNTGDKKSRQI
IRRAIRQNPDAVVCVTGCYAQTSSAEIMEIPGVDIVVGTQDRHKLLDYIQQFQDERQPIN
GVGNIMKNRTYEELEVPYFTDRTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPEKVVEQ
ATQLVNSGYKEIVLTGIHTGGYGQDLKNYNLAQLLRDLDTIEGLERIRISSIEASQLTDE
VIDVIGNSNKVVRHLHIPLQSGSDDVLKRMRRKYTMAHFSERLTKLHQALPDLAVTSDVI
VGFPGESEDEFQETYDFIVNHHFSELHVFPYSPRIGTPAARMDNQIDEETKNVRVHKLIS
LSNQLAKEYASKFEDEVLEVIPEEMGEEPHTLVGYADNYMKVRFEGDDSLIGQIVKVKIV
KANYPINEGKAIRVVKHATNQSEKEVLV
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagttgcgtttcacacattaggttgtaaagtaaaccattacgaaactgaagca
atttggcaattatttaaagatgcaaattatgaaagagtagaatttgaaacaaatgctgat
gtatttgttattaatacatgtacggtgacaaatacaggggataaaaaaagtcgtcagata
ataagaagagctattagacaaaatcctgatgcagtcgtttgtgtaactgggtgttacgca
caaacatcatctgccgaaattatggaaatccctggtgttgacatcgttgtaggtactcaa
gaccgacataaattgttagactatatacaacaatttcaggacgagagacaacctattaat
ggtgtaggcaatatcatgaaaaatagaacttatgaagaattagaagttccttactttact
gatagaacacgtgcttcattaaaaatacaggaaggctgcaataatttttgcacgttctgt
attatcccgtgggcacgtggattgatgcgttctagagatccagaaaaagtagtagaacaa
gctactcaacttgttaactctggttataaggagattgtattaacaggtattcacactggt
ggttatgggcaagaccttaaaaattataatctagcacaattgctaagagatttagatact
attgaagggcttgaacgtatacgtatttcttctattgaagcaagtcaacttactgatgaa
gttattgatgtcattggaaactcaaataaggtggtacgtcatttacatataccgctacaa
tctgggtctgatgatgtgttaaaacgtatgagacgtaaatataccatggcacatttttca
gaaagattgacaaaattacatcaagcattacctgatttagcagttactagtgatgtaatc
gttggtttccctggagaatctgaagatgaattccaagaaacttacgatttcatcgtaaat
catcatttttcagagttacacgtattcccttattctcctagaataggaacgcctgctgca
agaatggacaatcaaattgatgaagaaacaaaaaatgttcgtgtacacaaactaattagt
ctaagtaatcaattagccaaagaatatgcttctaaatttgaagatgaagttttagaagtt
atacctgaagaaatgggtgaagaaccacatacacttgttggctatgctgacaattatatg
aaggtaagatttgaaggagatgactcattaataggtcaaatagtaaaggtcaagatagtt
aaagccaattatccaattaatgaaggcaaagcaatacgtgttgttaaacatgcaacgaat
caatctgaaaaagaagtacttgtttaa
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