KEGG   Staphylococcus epidermidis ATCC 12228: SE_1324
Entry
SE_1324           CDS       T00110                                 
Name
(GenBank) holliday junction DNA helicase
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
sep  Staphylococcus epidermidis ATCC 12228
Pathway
sep03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SE_1324
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sep03400]
    SE_1324
Enzymes [BR:sep01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SE_1324
DNA repair and recombination proteins [BR:sep03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     SE_1324
    RecFOR pathway proteins
     SE_1324
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 DUF815 Mg_chelatase AAA_22 AAA_14 RNA_helicase bpMoxR AAA_3 AAA_16 nSTAND3 Sigma54_activ_2 TIP49 RsgA_GTPase ABC_tran Rad17 TsaE NB-ARC AAA_18 NTPase_1 AAA_28 Bac_DnaA AAA_17 INO80F NPHP3_N
Other DBs
NCBI-ProteinID: AAO04923
UniProt: Q8CS91
LinkDB
Position
complement(1356282..1357286)
AA seq 334 aa
MDKRMVDQEFHNEDTDLELSLRPTQLKQYIGQSSIKSNLEVFIKAAKLRQEPLDHVLLFG
PPGLGKTTLSNIIANEMEVNIRTISGPSLERPGDLAAILSGLQPGDVLFIDEIHRLSSVV
EEVLYPAMEDFFLDIIIGKGDEARSIRIDLPPFTLVGATTRAGSLTGPLRDRFGVHLRLE
YYNENDLKEIITRTAEVLGTDIDKESALELARRSRGTPRIANRLLKRVRDFQQVNEDDQI
YIETTKRALQLLQVDQHGLDYIDHKMMNCIINQYNGGPVGLDTIAVSIGEERVTIEDVYE
PFLIQRGFLERTPRGRKATALAYEHFNTTNEKRE
NT seq 1005 nt   +upstreamnt  +downstreamnt
atggataaaagaatggtcgatcaagaatttcataatgaagatactgacttggaattatca
ctaagaccaacacaattaaagcagtatataggtcaatcctctataaaaagtaatttagaa
gtctttatcaaggctgccaaacttagacaagagccactcgatcatgtcttgttatttggt
cctccaggactaggtaaaacgacgctatcaaatatcattgctaatgagatggaggtaaat
attcgtaccatctcaggaccatctttagaaagaccaggtgacttagcagcgatattatct
gggttacagccaggtgatgtgttatttatcgatgaaattcatagattaagtagtgttgtt
gaagaagttctgtatcctgctatggaagattttttcttagacatcatcatcggtaaaggc
gatgaagcaagaagtattcgaatagatttgccgccatttacattagttggagcaacgaca
agagccggtagtttaacggggccattaagagatcgttttggtgtgcatcttagattagag
tattataatgaaaatgatttaaaggaaataatcacgcgaactgcagaggtcttaggaacg
gacatcgataaggaaagcgccttagaattagctcgtcgttctagaggtacacctaggata
gcgaataggttactaaaacgtgtaagagacttccaacaagtaaatgaagacgatcagata
tatattgaaacgactaaacgagcattacaattactgcaggtcgaccaacacggtttagat
tacattgaccataaaatgatgaattgtattattaatcagtacaatggtggtcctgttgga
ttagatacaattgcagtttcaataggtgaagaacgagtgactatagaagatgtatatgaa
cctttcttaatccaaagaggtttcttggaaaggactccacgtgggagaaaagcaactgct
ttagcctatgaacactttaatactactaacgaaaagagggaataa

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