Staphylococcus epidermidis ATCC 12228: SE_1324
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Entry
SE_1324 CDS
T00110
Name
(GenBank) holliday junction DNA helicase
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
sep
Staphylococcus epidermidis ATCC 12228
Pathway
sep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SE_1324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sep03400
]
SE_1324
Enzymes [BR:
sep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SE_1324
DNA repair and recombination proteins [BR:
sep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SE_1324
RecFOR pathway proteins
SE_1324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
DUF815
Mg_chelatase
AAA_22
AAA_14
RNA_helicase
bpMoxR
AAA_3
AAA_16
nSTAND3
Sigma54_activ_2
TIP49
RsgA_GTPase
ABC_tran
Rad17
TsaE
NB-ARC
AAA_18
NTPase_1
AAA_28
Bac_DnaA
AAA_17
INO80F
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AAO04923
UniProt:
Q8CS91
LinkDB
All DBs
Position
complement(1356282..1357286)
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AA seq
334 aa
AA seq
DB search
MDKRMVDQEFHNEDTDLELSLRPTQLKQYIGQSSIKSNLEVFIKAAKLRQEPLDHVLLFG
PPGLGKTTLSNIIANEMEVNIRTISGPSLERPGDLAAILSGLQPGDVLFIDEIHRLSSVV
EEVLYPAMEDFFLDIIIGKGDEARSIRIDLPPFTLVGATTRAGSLTGPLRDRFGVHLRLE
YYNENDLKEIITRTAEVLGTDIDKESALELARRSRGTPRIANRLLKRVRDFQQVNEDDQI
YIETTKRALQLLQVDQHGLDYIDHKMMNCIINQYNGGPVGLDTIAVSIGEERVTIEDVYE
PFLIQRGFLERTPRGRKATALAYEHFNTTNEKRE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggataaaagaatggtcgatcaagaatttcataatgaagatactgacttggaattatca
ctaagaccaacacaattaaagcagtatataggtcaatcctctataaaaagtaatttagaa
gtctttatcaaggctgccaaacttagacaagagccactcgatcatgtcttgttatttggt
cctccaggactaggtaaaacgacgctatcaaatatcattgctaatgagatggaggtaaat
attcgtaccatctcaggaccatctttagaaagaccaggtgacttagcagcgatattatct
gggttacagccaggtgatgtgttatttatcgatgaaattcatagattaagtagtgttgtt
gaagaagttctgtatcctgctatggaagattttttcttagacatcatcatcggtaaaggc
gatgaagcaagaagtattcgaatagatttgccgccatttacattagttggagcaacgaca
agagccggtagtttaacggggccattaagagatcgttttggtgtgcatcttagattagag
tattataatgaaaatgatttaaaggaaataatcacgcgaactgcagaggtcttaggaacg
gacatcgataaggaaagcgccttagaattagctcgtcgttctagaggtacacctaggata
gcgaataggttactaaaacgtgtaagagacttccaacaagtaaatgaagacgatcagata
tatattgaaacgactaaacgagcattacaattactgcaggtcgaccaacacggtttagat
tacattgaccataaaatgatgaattgtattattaatcagtacaatggtggtcctgttgga
ttagatacaattgcagtttcaataggtgaagaacgagtgactatagaagatgtatatgaa
cctttcttaatccaaagaggtttcttggaaaggactccacgtgggagaaaagcaactgct
ttagcctatgaacactttaatactactaacgaaaagagggaataa
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