Staphylococcus epidermidis ATCC 12228: SE_2307
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Entry
SE_2307 CDS
T00110
Name
(GenBank) DNA polymerase III gamma and tau subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sep
Staphylococcus epidermidis ATCC 12228
Pathway
sep03030
DNA replication
sep03430
Mismatch repair
sep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SE_2307
03430 Mismatch repair
SE_2307
03440 Homologous recombination
SE_2307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sep03032
]
SE_2307
03400 DNA repair and recombination proteins [BR:
sep03400
]
SE_2307
Enzymes [BR:
sep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SE_2307
DNA replication proteins [BR:
sep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SE_2307
DNA repair and recombination proteins [BR:
sep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SE_2307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
RuvB_N
DNA_pol3_gamma3
AAA_30
AAA_5
TIP49
AAA_19
AAA_22
AAA_14
DnaX_C
RCF1-5-like_lid
AAA_16
Mg_chelatase
nSTAND3
AAA_assoc_2
AAA_24
AAA_7
AAA_18
TsaE
RNA_helicase
ResIII
Motif
Other DBs
NCBI-ProteinID:
AAO05949
UniProt:
A0A0H2VIE8
LinkDB
All DBs
Position
complement(2383910..2385616)
Genome browser
AA seq
568 aa
AA seq
DB search
MDYQALYRMYRPQSFDDVVGQTHVTKTLRNAISKGKQSHAYIFSGPRGTGKTSIAKVFAK
AINCLNSDDGEPCNECAICKGITQGTNNDVIEIDAASNNGVDEIRNIRDKVKYAPSESKY
KVYIIDEVHMLTTGAFNALLKTLEEPPAHAIFILATTEPHKIPPTIISRAQRFDFKAISS
DQIIDRLKYVANSQSLDYDDAALEFIAKASEGGMRDALSIMDQAIAFGDERLTLQDALNV
TGSVDEAALNELFNDIVKSDVKAAFNRYHHFISEGKEVNRLINDMIYFVRDTIMNKTSNE
SVHFESLIHFDLDMLYRMIDIINDTLVSIRFSVNQSVHFEVLLVKLAEMIKTQPQTVQNV
ATASVANEPDNEMLLQRLEQLENELKTLKEQGIKTNKVSQQPKKPTRTIQRSKNTFSMQQ
IAKVLDKANKDDIKLLKNHWQEVIDHAKSNDKKSLVSLLLNSEPVAASEDHVLVKFDEEI
HCEIVNKDDEKRNNIESVVCNIVNKTVKVVGVPADQWLRVRAEYLQNRNTNETHQSEKQS
TQQSQQIDIAQKAKDLFGEETVHLVDED
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
gtggattaccaagctttgtatcgtatgtatagaccgcaaagttttgatgatgtggttgga
caaacgcatgtaactaaaacgctgcgtaatgcaatttcaaaaggtaaacaatcccatgca
tatatttttagtggtccgagaggtacgggtaaaactagtattgcaaaggtttttgccaaa
gctattaattgtcttaatagtgacgatggtgaaccttgtaatgaatgtgcgatttgtaaa
ggaatcacacaaggtacgaataacgatgtaattgaaattgatgctgcaagtaataacggt
gtagatgaaataaggaatattagagataaagttaagtacgcacctagtgaatctaagtat
aaagtatatattattgatgaggttcatatgttaactactggtgctttcaatgctttgctt
aaaacattagaagaaccaccagcgcatgctatatttatcttggcaacaacagaaccacat
aaaattccacccactattatttcgagagcgcaacgatttgactttaaagcaattagcagt
gaccaaattatagatagacttaagtatgtagctaattctcaatctttggattacgatgac
gcagcattagaatttattgctaaagcatcagaaggtggtatgcgagatgcattaagcatt
atggatcaagcaatagcgtttggagacgaacgacttactttacaagatgctttaaatgtt
acaggtagtgttgatgaagcggcattaaatgagttatttaatgacattgtaaaaagtgat
gttaaagccgcatttaatagatatcatcattttatttcagaaggtaaagaagtcaacaga
ctcattaatgatatgatttactttgttagagatacaattatgaataaaacgtctaacgaa
tccgttcattttgaatcacttattcatttcgacttagatatgttatacaggatgatagat
atcatcaatgatacactagtatccattaggttcagtgtaaatcaaagtgttcattttgaa
gtgttgctagttaaacttgcagaaatgattaagacacagcctcaaactgtacaaaatgta
gcaacagcatcggtagctaatgaaccagataatgagatgttattacaacgtttagaacaa
cttgaaaatgagcttaaaaccttaaaagaacaagggatcaaaactaataaagttagtcaa
caacctaagaaaccaacacgtacgattcaacgatctaaaaatacgttttctatgcaacaa
atagcgaaagtattagacaaagcaaacaaagatgatatcaaattgttgaagaaccattgg
caagaagtgattgatcatgcaaaaagtaatgataaaaagtctttagtaagtttgctactg
aattcagaaccagtagcagctagtgaagatcatgtgttagttaaatttgatgaagaaatt
cattgtgaaatagtaaataaagatgatgaaaagagaaacaatattgaaagtgtagtttgt
aatatagttaataaaactgtcaaagtagttggagtgccggctgaccaatggctgagagtg
agagcagagtacttacaaaatcgtaacaccaatgaaacacatcaaagcgaaaaacaaagc
acacaacagtctcaacaaatagatattgctcaaaaagctaaagacttatttggtgaggaa
actgtacacttagttgatgaagactga
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