Candidatus Southlakia epibionticum: SEML1_0086
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Entry
SEML1_0086 CDS
T11187
Symbol
tagU
Name
(GenBank) LytR family transcriptional regulator
Organism
sepb Candidatus Southlakia epibionticum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LytR_cpsA_psr
DUF389
Adeno_VII
DUF496
HTH_60
SpoIIM
NPH3
Motif
Other DBs
NCBI-ProteinID:
WIO45728
UniProt:
A0ABY8WTC3
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Position
85753..87156
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AA seq
467 aa
AA seq
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MSKEQKTSLFAWLQRLVGAGIIVTAIPAGINLFAMGVIPDKYLYIIAPLYAAVAGVVLWQ
LIRRSKAVWRGVLFMVIGMVMITVNVAVYKSGHSVNSFLNAVQPPQVNYVEYTVIAKKDR
SVVLDSARSVGMVGADTLHDKTAKALAGVTPAAQSSYDSLMALTEQLNAGAVELASIRTA
NMGVLQENYREFYDSVATLATYKVRDDNRQAAPKTDVTKPFVLYISGIDTYGDVGEVSRS
DVNMLAVMNPAKRTMLLVNTPRDYYVQLHGVAGMPDKLTHAGIYGIDMSRQTLGDLYGVD
IPYYVRLNFTSLVKMVDVVGDITVDSDYAFHSFQAGKNTLDSKRTLEFARERYSFSDGDR
QRGRNQQKVIEAIVAKMSEPRNLTRYNAILSTLQSSLQTNMSQETIASLIKMQLNDFKGW
RVESMSVDGAGATRQTYSMGAMPLYVMIPDSASVERAKERIGEYLQS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaagaacagaaaacgtcgctgttcgcgtggctgcagcggttagttggtgcgggt
atcattgtgacggcgatccctgcaggaattaacctatttgcgatgggcgtgatccccgac
aagtatttatatatcatcgcgccgttgtatgcggcggtggcgggcgttgtgttgtggcag
ttgatacgccggtcgaaagcggtatggcgcggtgtgctattcatggtaattggcatggtg
atgatcaccgttaatgttgccgtgtacaaaagcgggcactcggtgaattcgtttttgaac
gcagtgcagccgccgcaggttaattatgtagaatacacggttatcgcgaagaaagaccgc
agcgtggtacttgattctgctcggtcggtcggtatggtcggggcagacacactgcacgat
aaaacagcgaaagcacttgccggcgtaacgccggcggcgcagagcagctatgacagtttg
atggcgctgacggaacaactcaatgctggagcagttgaattggcgtcaatccgaacggcg
aatatgggcgtattgcaagaaaattaccgtgaattttatgacagcgtagcgacgcttgcg
acttataaggtgcgggatgataatcgccaggctgcgccgaaaactgacgtaacgaagccg
tttgtgctgtacatcagcggcattgatacgtatggcgatgtgggtgaggtgtcgcggagc
gatgtgaatatgctggcggtgatgaatccggcgaagcggacgatgctgctcgtaaacacg
ccgcgggattattatgtgcagctgcacggcgtggcaggtatgccggataagttgacacat
gcgggcatttacggtattgacatgtcgcggcaaacgcttggtgatctgtatggtgttgat
attccatactatgtgcggttgaactttacgtcgctcgtgaagatggttgatgtcgtgggc
gacattacggttgattctgattatgcgtttcattcgttccaggcgggcaaaaatacgctt
gatagcaagcgaacgcttgagtttgcacgcgaacgctatagctttagtgacggtgatcgt
cagcggggacgtaaccagcagaaggtaattgaggcgatcgtcgcgaagatgagcgagccg
cgcaacctgacacgatataacgcaattttgtcgacgttgcaaagttcgttgcaaacaaac
atgagccaggagacgattgcatcgttgataaaaatgcaacttaatgattttaagggttgg
cgcgttgagtcaatgagcgttgacggtgcaggcgcaacccgccaaacgtatagcatgggc
gcgatgccgctgtacgtgatgattcctgacagcgcgtcggtagagcgggcgaaagagcgg
attggagagtatttgcagtcgtag
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