Candidatus Southlakia epibionticum: SEML1_0102
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Entry
SEML1_0102 CDS
T11187
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
sepb Candidatus Southlakia epibionticum
Brite
KEGG Orthology (KO) [BR:
sepb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sepb03009
]
SEML1_0102
Enzymes [BR:
sepb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
SEML1_0102
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
SEML1_0102
Ribosome biogenesis [BR:
sepb03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SEML1_0102
23S rRNA modification factors
SEML1_0102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_23
Methyltransf_25
Methyltransf_12
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
WIO45742
LinkDB
All DBs
Position
102008..102748
Genome browser
AA seq
246 aa
AA seq
DB search
MKQRLDKMMVIRGLAATRSEAANWIQLGRIHVNGRVAVKAGEFVDEASDVTMNAPERYVS
RAGLKLASVAHKLAVSFDGAVVLDVGSSTGGFTDYALQHGARLVYAVDVGTNQLHPKLRE
DRRVELHEKTDIRDFSPAQTPDIIVIDVSFISLRQILPYIRTLAGLNTKIIAMVKPQFEA
GRGQLGRSGVIKNNTIRRAILKDFELWARSFFRILDKADSTVKGAHGNQERFYLFASGGL
NASAKH
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaacggcttgataaaatgatggttatacgcggactagcggcaacgcgtagcgag
gcggcaaattggattcagctagggcgcatacatgtgaatgggcgggttgcggtaaaggcg
ggcgaattcgttgatgaagcaagcgatgtgacaatgaacgcgccggagcgctacgtgagt
cgggcagggctcaagcttgcgagcgttgcgcataaacttgccgtgtcgtttgatggcgcg
gttgtgcttgatgtcggcagcagtacgggcggatttaccgattacgcactgcagcatggt
gcgcggctagtctatgcggttgatgtcggcacgaaccagttgcacccgaaattacgcgag
gatagacgcgttgaattacatgaaaaaaccgatattcgcgatttttcgcccgcgcaaacg
cccgacattattgtgatcgacgtatcgtttatcagcctgcgccaaattttaccgtatatc
cgtacgctagctggcttgaacacaaaaattattgcaatggtaaagccgcaatttgaagca
gggcgcggacaacttggccggagcggcgtaattaaaaataacacgattcgccgcgcgatt
ctcaaagactttgaactatgggcgcgctcgtttttccgtatcctagataaagccgatagc
actgtaaaaggcgcgcacggcaaccaagaacgattttatctatttgcatccggcggtcta
aacgctagcgcgaaacattga
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