Candidatus Southlakia epibionticum: SEML1_0103
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Entry
SEML1_0103 CDS
T11187
Symbol
ychF
Name
(GenBank) Ribosome-binding ATPase YchF
KO
K06942
ribosome-binding ATPase
Organism
sepb Candidatus Southlakia epibionticum
Brite
KEGG Orthology (KO) [BR:
sepb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sepb03009
]
SEML1_0103 (ychF)
Ribosome biogenesis [BR:
sepb03009
]
Prokaryotic type
Other maturation factors
SEML1_0103 (ychF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YchF-GTPase_C
MMR_HSR1
FeoB_N
Dynamin_N
Zw10_N
TGS
Arf
MeaB
Motif
Other DBs
NCBI-ProteinID:
WIO45743
UniProt:
A0ABY8WTE7
LinkDB
All DBs
Position
complement(102732..103880)
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AA seq
382 aa
AA seq
DB search
MHKFFEKHKHFTSFLLCGILRNMSLSIGIVGLPNVGKSTLFNALTNNDILAANYPFATIE
PNTGVVPVPDERLETLAEMYHAEKIIPATVTFVDIAGLVAGAANGEGLGNKFLANIRNCD
AIVHIVRAFAHGDIVHVENNVDPARDIETINTELILADIQTIETRLAKLTKEAKANPEAL
DRVNRLGAIVTELKAGKPINEQSNIEAEDIADLHLLTAKPVIYVFNVNEETLSNDAAKQE
LRALVPKSRSLFICAKLEDELKGLNESDALELLQSYEVSETGLTQMIHAAYDILGLQSYV
TAGPKEVRAWTIHQGWTAPQAAGVIHSDFERGFIAAQVVNYRDLVTAGSEAAARAAGKIR
TEGKDYVMQPDDVVEFRFNVSR
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcataagtttttcgaaaaacacaagcatttcaccagttttctcctgtgcggtatacta
aggaatatgagtctatcaattggaatcgtcggcttgcctaatgtcggcaagtctacgcta
tttaatgcgttaacaaacaatgatattttagcggcaaattacccatttgccacgattgag
ccgaatactggcgtcgtgcccgttccggacgaacggttggaaactcttgcagagatgtac
catgccgaaaaaataattcccgccaccgtgacgttcgtcgatatcgcaggactcgtcgca
ggcgcagcaaacggcgaaggcttaggaaataaatttctcgcaaacatacgaaactgcgac
gcaattgtgcacattgtgcgtgcatttgcgcacggcgacattgttcatgtggaaaataac
gtcgatcctgcgcgtgatatcgaaacgatcaataccgaactaattttagctgatattcag
acgatcgagacgcgccttgccaaactcaccaaagaagccaaagctaatccagaagcgctt
gatcgcgtcaaccgcttgggggcaatcgttaccgaacttaaagctggaaagccaatcaac
gaacaatcaaacattgaagcggaagacattgccgacctacatttactaacagccaaacct
gtcatttatgtgtttaacgttaacgaagaaacgttatcaaacgacgcagctaagcaagaa
ttacgcgcgctcgtgccaaaatcacgcagtttattcatctgcgctaaattagaggacgag
ctcaaaggactcaacgaaagtgatgcgcttgagcttttgcaaagttacgaagtctccgaa
actggcttaacgcaaatgattcacgccgcttatgatatcctcgggctgcaaagttacgta
actgccgggccgaaagaagtgcgcgcctggacaattcaccagggctggaccgcgccgcaa
gccgctggcgttatccacagcgattttgagcgtggatttatcgccgcacaggtcgttaac
taccgcgaccttgtaactgccggctcggaagcagccgcacgcgccgccggaaaaatccgc
accgaaggtaaagattacgtcatgcagcccgacgatgtcgttgagtttcggttcaatgtt
tcgcgctag
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