Candidatus Southlakia epibionticum: SEML1_0145
Help
Entry
SEML1_0145 CDS
T11187
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sepb Candidatus Southlakia epibionticum
Brite
KEGG Orthology (KO) [BR:
sepb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sepb03032
]
SEML1_0145 (gyrB)
03400 DNA repair and recombination proteins [BR:
sepb03400
]
SEML1_0145 (gyrB)
Enzymes [BR:
sepb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SEML1_0145 (gyrB)
DNA replication proteins [BR:
sepb03032
]
Prokaryotic type
DNA Topoisomerases
SEML1_0145 (gyrB)
DNA repair and recombination proteins [BR:
sepb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SEML1_0145 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
DUF6824
Motif
Other DBs
NCBI-ProteinID:
WIO45781
UniProt:
A0ABY8WW10
LinkDB
All DBs
Position
142314..144308
Genome browser
AA seq
664 aa
AA seq
DB search
MAKQKDDGSYDGSQIQVLEGLDPVRKRPGMYIGSTGYDGVHHLIKEIADNSIDEAIAGHG
TRVDVRILEDGGITITDDGRGIPVDKHPKTGLSTLETVLTVLHAGGKFGGGGYKVSSGLH
GVGSSVVNALSSRMIAEVAKNGSIYRIEFERGKTVVPFKKSRLTDENWTRGTRITFYPDP
EIFKETTKFDYRWVVSYLRHQAYLTKGVYVTVYDERTKERQAFYFEGGIRSYVKNLNVGK
DVLGNEIFYVEKQVDDSMVEVAIQYNDSYVETVKPFANNVLTPDGGTHLAGFRSALTRVI
NDYARKNNLLKEKEDNLSGDDIREGLTAVILVKLPDPQFEGQTKNKLGNPEVRRYVEQVM
NEYFAYFLEENPAVAKKIVNKALLAARARKAARAARDNVIRKGALDGASLPGKLADCSSK
NPAECELYIVEGDSAGGSAKTGRDSRTQAILPLRGKVLNTERARLDKMYANREILSLIKG
MGVGIGDAFDMRGLRYHRVVIMTDADVDGSHIATLLMTFFFRYMRPVVEGGYIYLAKPPL
FKLKLSQHKQEYLYNEEALDAKYQELIAARKEKGVAIDPSEPLVRQAGLSESSLQRYKGL
GEMDADQLWETTMNPENRVLVQVRLEDAERADAIFTKLMGNEVEVRKNFIQANAKKMSLE
ELDV
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacaaaaagacgacggttcttatgatggttcgcaaattcaggtccttgaaggt
cttgacccggttcgcaagcgcccaggcatgtacattggaagcacgggttacgacggtgtt
catcatttgattaaagaaattgccgacaactctatagacgaagcaattgctggtcacggc
acacgtgttgacgtgcgaatccttgaagatggtggtattacgattaccgatgacgggcgc
ggtatcccggtagataagcatccgaaaactggtttgagtacgcttgagacagtattgact
gtgctacatgctggcggtaagtttggcggcggcggttataaggtttcgtctggattgcat
ggtgttggctcaagcgtggtgaatgctttgtcgagccgaatgatcgctgaagtcgcaaaa
aacggttcaatatatcgaattgaatttgagcggggcaaaacagtcgtgccgtttaagaaa
agccgtttgacagacgagaattggacgcgcggcacgcggattacgttttatcccgatcct
gaaatattcaaagaaacgacgaaatttgactatagatgggtcgtgagttatcttcgccat
caggcctatctgacaaaaggcgtgtatgtaacggtttatgatgagcgcaccaaagagcgc
caagcgttttattttgaggggggcattcgcagttatgtgaagaacctcaacgtcggcaag
gatgttcttggtaacgaaattttctacgttgaaaagcaggttgacgattcaatggttgaa
gtagcaattcagtataatgattcctacgttgagacagtgaaaccgttcgcaaataacgtg
ttaactccagatggcggtacgcatttagctggttttcggtcggcgctcacgcgcgttata
aacgattatgcgcgtaaaaacaatctgctaaaagaaaaggaagataatttatctggcgat
gatattcgcgaaggtttgacggcggtgattttagtgaagctgcccgatccgcagttcgaa
ggccagacgaaaaataagcttggtaatccagaggtgcggcggtatgtcgaacaggtgatg
aatgaatactttgcgtattttctggaagagaatccagcggttgcgaagaaaattgtcaat
aaagcgttgcttgcagcccgagcgcgcaaagcagcccgagccgcacgcgataacgtgatt
cgcaaaggtgcgcttgatggcgctagtctacctggtaagttagcagactgttcaagtaag
aatccagctgagtgcgagctctatatcgttgagggtgattcggctggcggctcggcgaag
acggggcgcgatagtcgtacgcaggcgattttgccgctgcgaggcaaggttctgaacact
gaacgggctcgtcttgataaaatgtatgcaaatcgcgagatactaagcttgataaagggc
atgggtgtcggtattggcgatgcgtttgacatgcgcggcttgcgttatcatcgtgttgtg
attatgaccgacgctgacgttgacggtagccatatcgcgacgctgcttatgacattcttc
ttccggtatatgcgtccggtcgttgaaggtggttatatctatctcgcaaagccgccatta
tttaagttgaagctatcgcagcataaacaggagtatttgtataatgaggaagcgcttgat
gcgaagtatcaggaattgattgctgctcgcaaagaaaaaggcgtcgcgattgatccgagc
gagccgctcgttcgacaagcagggttgagcgagtcgtcgttacaacgctacaaaggtctt
ggtgagatggatgctgatcagttatgggaaacaacaatgaacccggaaaatcgtgttttg
gtgcaggttcggcttgaagatgcagagcgtgctgatgcgatttttactaaactgatgggt
aatgaggtcgaggtgcgcaaaaactttattcaagcaaatgcaaagaaaatgagtcttgag
gaattggatgtctaa
DBGET
integrated database retrieval system
