Candidatus Southlakia epibionticum: SEML1_0197
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Entry
SEML1_0197 CDS
T11187
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sepb Candidatus Southlakia epibionticum
Pathway
sepb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sepb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SEML1_0197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sepb03400
]
SEML1_0197
Enzymes [BR:
sepb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SEML1_0197
DNA repair and recombination proteins [BR:
sepb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SEML1_0197
Prokaryotic type
SEML1_0197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WIO45827
LinkDB
All DBs
Position
191519..192124
Genome browser
AA seq
201 aa
AA seq
DB search
MNRVDAERKVKDVYPLRPDMFSCFAQCPLETTKVVIIGQDPYHGPGQAHGMCFSVRPGVP
VPPSLQNIFKELHDDLGCDIPKSGFLEEWAKRGVLLMNTSWSVERGKPASHAGLGWMEFS
EHLLEFLNEFEQPLVFLLWGAHAQKVGQKITNPRHLKIASPHPSPFSADRGFFGSRPFSR
ANEFLEKTGRGAVDWQIRERE
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgggtagacgccgaacgcaaagttaaagacgtatacccgctcagaccagacatg
ttctcatgttttgctcagtgtccgcttgaaacgacaaaagtcgtaatcattgggcaggac
ccgtatcatgggccagggcaggcgcatggcatgtgtttttcggtgcgaccgggtgtgccg
gtgccgccgagtttgcagaatatttttaaagaactgcatgatgatttggggtgcgatatt
cctaagagcggttttttagaagagtgggcgaagcgcggcgtgttgcttatgaacacgtca
tggagcgttgaacgcggcaagccggcaagccacgctggtcttggttggatggaattctct
gaacacctcttagaatttttgaatgaatttgaacagccattagtgtttctgctgtggggt
gcgcatgcccaaaaagtggggcagaaaatcactaatccgcgccatctaaaaattgcgagc
ccgcatccgtcgccattttccgccgaccgcggtttcttcggcagccggccgttctcgcgg
gctaatgagtttttagagaaaaccggccgcggcgcggttgattggcaaatccgcgaacgc
gaataa
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