Candidatus Southlakia epibionticum: SEML1_0264
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Entry
SEML1_0264 CDS
T11187
Name
(GenBank) DEAD/DEAH box helicase
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
sepb Candidatus Southlakia epibionticum
Brite
KEGG Orthology (KO) [BR:
sepb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sepb03032
]
SEML1_0264
03029 Mitochondrial biogenesis [BR:
sepb03029
]
SEML1_0264
Enzymes [BR:
sepb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
SEML1_0264
DNA replication proteins [BR:
sepb03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
SEML1_0264
Mitochondrial biogenesis [BR:
sepb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
SEML1_0264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
Viral_helicase1
AAA_22
DEAD
AAA_16
Pif1_2B_dom
AAA_5
AAA_11
AAA_14
SH3_13
AAA_7
AAA
ATPase_2
DUF4158
PDXDC1-like_cen2
SLFN-g3_helicase
ATPase
UvrD_C_2
nSTAND_NTPase5
CobA_CobO_BtuR
AAA_24
AAA_25
nSTAND3
Herpes_Helicase
ATP-synt_ab
TrwB_AAD_bind
cobW
T2SSE
Motif
Other DBs
NCBI-ProteinID:
WIO45894
UniProt:
A0ABY8WW53
LinkDB
All DBs
Position
250274..251803
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AA seq
509 aa
AA seq
DB search
MKQSLALEILLSGESALLTGPAGTGKTFVLNQFIRASKDEGKYVSVTATTGLAATHLGGT
TIHAWAGIGVLDYLPDQFVDHIAKGRREIIEKTDILIIDEISMLHDYRLDMVDEVCRLVR
KAPDVPFGGIQVVMSGDFFQLPPVNRAGSREGGFVVHSDAWRELNPVILYLDEQFRQREG
DALLDILTSLRANNLRRHHAEKLLERTGYEPPTDADLTELHTMNVDVDQINGRRLAELAG
DEVQYTQHTTGSANYVENLQRSVLAPVELVLKLGALVMAVKNDQSKRYANGSIGMVVDFE
PATDYPVVQFRNGRTVVMQPDTWELRDGDKKRASISQIPLRLAWAITVHKSQGMTLDAAR
IDLRKAFVPGMGYVALSRVRDIDNLYLTGINRTALQMSDEAYTIDERLKMRAANDRERFQ
YLQRKAEERAAKPLKNPSKKKSSSWSEKIAKMREIHPNAYKPWQPQDDEALKLGFINGES
IKHLSTQLGRHEGSIKMRLQKHFGEDAVQ
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaatctcttgcactcgaaatattactaagtggcgaaagtgcattgctaactgga
ccggcagggacgggcaagacgtttgtgctgaatcaatttattcgtgcgagtaaagatgag
ggaaagtatgtgagcgtgacggcaacgactgggctagcggcgacacacctgggcggcacg
acgattcacgcttgggcggggataggcgtactggattatctgccagatcaatttgtcgat
catattgcgaagggacggcgcgaaattatcgaaaaaacagatattttgatcattgatgag
attagtatgctgcacgactaccgcttggatatggttgatgaagtatgccgtctggtgcgt
aaggcgccggacgtaccgtttggcggtattcaggtggtgatgtcgggtgactttttccag
ctgccgccagtgaatcgggcaggcagccgcgagggcggttttgtggtgcattcggatgcg
tggcgcgagctgaatccggtgattttgtatttggatgagcaattccgccagcgcgagggt
gatgcgctccttgatattttgacgagtctacgggcaaataacctgcgtcgtcatcacgcc
gagaagctgctagagcgcaccggatacgagccgccaacggacgctgacttgacagagctt
catacgatgaatgttgacgttgatcaaatcaatgggcgaagactagcagagttagcaggc
gacgaagtgcaatatacgcagcataccaccggcagcgcaaactacgttgaaaatttgcaa
cgcagcgtgcttgcgccggtggaattagtactcaagcttggcgcgcttgttatggcggtt
aagaacgatcagagtaaacgttatgcaaacggcagtatcggtatggtagttgattttgag
ccggcaacagattatccagtagtgcaattccgtaacggcagaacggtagtaatgcagccg
gatacgtgggaattgcgcgatggcgacaaaaagcgggcaagtatcagccagattccgttg
cgcttggcgtgggcgattacggtacacaagagccagggtatgacgcttgatgcagcgcgc
attgacttacgcaaagcctttgtaccgggcatgggctatgtagcactcagccgcgtgcgc
gatattgataatttgtacttgacgggtataaaccgtacggcactccagatgagcgacgaa
gcgtatacgattgacgagcggttgaaaatgcgtgcggcaaacgatcgcgaacgatttcaa
tacttgcaaagaaaagctgaggagcgtgccgctaaaccgctaaaaaacccgagcaaaaag
aaatccagcagctggtctgaaaaaatcgctaaaatgcgcgagatccacccgaatgcgtac
aaaccgtggcagccgcaggacgacgaagcactaaaacttggattcattaacggcgagtcg
atcaagcacttgagtacacagctcggccgccacgaaggttcaatcaaaatgcggttgcag
aaacattttggggaagacgcggtgcagtaa
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