Candidatus Southlakia epibionticum: SEML1_0310
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Entry
SEML1_0310 CDS
T11187
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
sepb Candidatus Southlakia epibionticum
Brite
KEGG Orthology (KO) [BR:
sepb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sepb03009
]
SEML1_0310
Enzymes [BR:
sepb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
SEML1_0310
Ribosome biogenesis [BR:
sepb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SEML1_0310
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
WIO45940
UniProt:
A0ABY8WU63
LinkDB
All DBs
Position
complement(299623..300330)
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AA seq
235 aa
AA seq
DB search
MNTPHDTDKSSERLNKFLARQLGISRREADVLIENETVTINNTLATLGARITPSDSIDVA
GAPVSHKPAALRYIALNKPVGYVCSRRAQGSTPTIYSLLPPEFHALKPVGRLDKDSSGLL
LLTNDGDFAYRMTHPKFAKTKQYRVRLDRDLEPLHQQMISDFGIDLDDGRSQLILTRLDD
NRREWHITMSEGRNRQIRRTFTALGYTVTRLHRTNFGNYALSDINRGEWREVNIS
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgaatactccgcacgacaccgacaagtcatcggaacggctcaataagttcctcgcgcgg
cagctcggcatctcacgccgcgaggctgatgttttgatcgaaaatgaaactgtcacaatc
aataatacgctcgctacgcttggtgcgcgtattacgccgagcgatagcattgacgtcgca
ggggcgccagtctcccataagcctgccgcgctacgctacatcgcactcaataaacccgtt
ggctacgtttgttcgcgccgtgcgcaaggcagcacgccgacaatttattcgctgctgccg
cccgaatttcacgcactcaaaccggtcggacgccttgacaaagatagttctggattactg
cttctcaccaacgacggcgacttcgcgtaccgcatgacgcacccaaaattcgctaagaca
aagcaatatcgcgtccgccttgaccgcgaccttgagccgctccaccagcaaatgatcagc
gacttcggcatagatcttgacgacgggcgcagccagctcatactcacgcgcctcgacgac
aaccgccgcgaatggcacatcactatgagtgagggacgcaatcggcaaatccgccgcaca
tttacagcgctcggttacaccgtcactcggctacaccgcacgaatttcgggaattatgcg
ctgagtgatataaatcgaggagaatggcgagaggtaaatatatcataa
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