Candidatus Southlakia epibionticum: SEML1_0448
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Entry
SEML1_0448 CDS
T11187
Symbol
rpsD
Name
(GenBank) 30S ribosomal protein S4
KO
K02986
small subunit ribosomal protein S4
Organism
sepb Candidatus Southlakia epibionticum
Pathway
sepb03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
sepb00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
SEML1_0448 (rpsD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
sepb03011
]
SEML1_0448 (rpsD)
Ribosome [BR:
sepb03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
SEML1_0448 (rpsD)
Bacteria
SEML1_0448 (rpsD)
Archaea
SEML1_0448 (rpsD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S4
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
WIO46069
LinkDB
All DBs
Position
complement(428445..429062)
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AA seq
205 aa
AA seq
DB search
MARDRSPIVKQSRREGVALHPKAHKILARKSGIPGEHAHGRQGKQSMYATQLREKQKVRR
MYGLLEKQFAKLMNEAVRKPGLAGENLLKFLELRLDNAVYRAGFATSRRQARQLVSHGHF
ELNGRRVDIPSIRVKAGDVITVRPKSVKSGYFTNINDIYSNTSQVPLSWLTGDVKKLKIE
ITGAPKREEAEADINEQLIVEYYSR
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgagatagaagcccaatagtgaagcagagccgccgcgaaggcgttgcgcttcat
ccaaaagcgcataagattcttgcgcgtaaaagtggtattccgggcgagcacgctcatgga
cgccaaggcaagcagagcatgtacgctacgcagctgcgtgaaaagcagaaagtgcgccgc
atgtatggtttgcttgaaaagcaattcgcaaagttgatgaacgaagcggttcgcaagccg
ggactcgctggtgaaaacctactgaaattcctggagttacgtttagataatgctgtatat
cgcgctggtttcgcgacgagccgccgccaagcgcgccaactcgtgagccacgggcatttc
gaactcaatggccgccgcgttgatattccgtcgattcgcgttaaagccggcgatgtcatt
accgttcgtccaaaaagcgtcaaatcgggctacttcacgaacataaacgatatctacagc
aatacgtcgcaagttccgctcagctggttgacgggtgatgttaaaaagctgaagattgaa
atcactggcgcgccgaagcgcgaggaagccgaagcagatattaatgagcagctaattgtt
gagtattactcacgctaa
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