Candidatus Southlakia epibionticum: SEML1_0510
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Entry
SEML1_0510 CDS
T11187
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sepb Candidatus Southlakia epibionticum
Brite
KEGG Orthology (KO) [BR:
sepb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sepb03400
]
SEML1_0510 (radA)
DNA repair and recombination proteins [BR:
sepb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SEML1_0510 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
ChlI
AAA_16
AAA_22
AAA_30
ATP-synt_ab
AAA
AAA_24
ABC_tran
nSTAND3
RecA
AAA_5
AAA_19
GvpD_P-loop
NTPase_1
Lon_C
DUF7125
NACHT
RsgA_GTPase
AAA_14
NB-ARC
DZR
DAP3
SLFN-g3_helicase
GvpD_bR2
AAA_29
Zeta_toxin
PHY
A2L_zn_ribbon
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
WIO46129
LinkDB
All DBs
Position
complement(482672..484024)
Genome browser
AA seq
450 aa
AA seq
DB search
MVKARSQFVCQQCGASYPKWVGKCENCGEWNSLVEQVVHAAGNSAVARSAAHGNILKAQS
MRSISAEVSTARLGTGIADLDAVLGGGILPGGVMLLAGQPGIGKSTLLLQIAAHISEDAL
VLYASGEESASQVKLRARRLGAVAGDHLQFVASTSADDIAATIRSGAYKLVIIDSIQTLS
LEEVASAPGTVSQITNSSNVIIRAAKASGAAVILVGHVTKEGSIAGPKVLEHLVDVVLQF
EGDRYGGFKVVRAVKNRYGSTSEAAIFEMSERGLSVVENPSAALLAERQNADGSVVLATL
EGNRPILVEIQALVNSTNFGYPKRTASGFDLNRLNLLIAVLEKRTKLNLSDKDIYINVVG
GLKLADTAADLAVAMAIASAAAGRKLDDGLVVFGEVGLGGEIRSARLPNKRIAEAKKLGF
TQAIAPKSGKKNSFVRGAHDLRQALIDYMK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
gtggtaaaagcgcgcagccaatttgtgtgccagcagtgcggcgcgagctacccgaaatgg
gtcggcaagtgtgagaattgcggcgagtggaattcactcgtggagcaggttgtgcatgcg
gcgggcaattcagcagtggcgcggagtgctgcgcacggcaatatattgaaagcgcagtca
atgcgttcaatctcagcagaagtatcaaccgcgcgtcttggcacgggtattgccgatcta
gacgcggtattgggcggcggtattttgccgggcggcgttatgctactggctggtcaaccg
ggtatcggcaagtcgacgctattgctgcaaatagcggcgcatatctctgaggacgcgcta
gtgctgtacgcgagcggcgaggagtcggcgtcgcaagttaaactgcgagctcggcgcttg
ggtgcggtggcgggcgaccatttgcaatttgtcgcaagcacgagcgctgacgatattgcg
gcgacgattcgcagcggcgcttacaaacttgttattattgatagcattcaaacgcttagc
cttgaagaggtggcgagcgcgccgggaacggtcagtcaaattactaactcaagcaacgtc
attattcgtgccgctaaagcgtccggtgcagcagtgattttggtcggacatgtcacgaaa
gaaggttcaattgccggaccaaaagtattggagcatttagttgatgtcgtgctacagttt
gagggcgaccgctatggtggcttcaaagtagtgcgcgcggtaaagaatcgctacggctca
actagcgaggcggcgatctttgagatgagtgaacgcggtttgagcgtggtcgaaaatccg
tcggcggcattacttgccgagcgtcaaaatgctgatggatcggtagtgcttgctacgctt
gaaggtaatcgtccgattttggtagaaattcaagcccttgtcaattcgacaaatttcggg
tatcctaaaaggacggcgagcggattcgacttgaatcgcctcaacctgttgattgctgtg
cttgagaaacgcacaaaactgaacttatctgacaaagatatttatatcaatgtagtgggc
ggactgaagttggcggatacagcggccgatttggctgttgcgatggcgatcgcttcggcg
gcagcggggcgcaagctagacgatggcttggtggtgttcggtgaagttggtttgggcggt
gaaatccgctcggcgcgactacctaataagcgtattgctgaggcgaagaagctcggtttt
acccaggcgattgctccaaaatcgggcaaaaagaattcatttgtgcgcggcgcgcatgat
ttgcgccaggcgctcattgactacatgaagtag
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