Candidatus Southlakia epibionticum: SEML1_0516
Help
Entry
SEML1_0516 CDS
T11187
Symbol
tgt
Name
(GenBank) tRNA guanosine(34) transglycosylase Tgt
KO
K00773
queuine tRNA-ribosyltransferase [EC:
2.4.2.29
]
Organism
sepb Candidatus Southlakia epibionticum
Brite
KEGG Orthology (KO) [BR:
sepb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sepb03016
]
SEML1_0516 (tgt)
Enzymes [BR:
sepb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.29 tRNA-guanosine34 preQ1 transglycosylase
SEML1_0516 (tgt)
Transfer RNA biogenesis [BR:
sepb03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
SEML1_0516 (tgt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGT
Motif
Other DBs
NCBI-ProteinID:
WIO46135
LinkDB
All DBs
Position
490823..492067
Genome browser
AA seq
414 aa
AA seq
DB search
MDTALTFDITRRLPGTLARAGVIHTPHGEIRTPAFIVGGTKATVKAITPEQIRSYGGQAV
LANTYHLMLRPGADIVRAGGGLGSFMNWDGPTFTDSGGFQVFSLGIAYKKGIDAVAHTQK
GNAKLAVVSRNQLVRVTDEGAEFRSHIDGAKLLMTPESSMELQHTIGADIHMAFDELTAP
LASHETIAAAMNRTHAWAERCLKRHSDLNMEHTERGENLQALYGVVQGARDKALRRESAA
FLGARKFDGYGIGGVFEPGEISSVVRWVCETLPAEKPRHLLGMGSQPADLFLGVEYGIDT
FDCVAPTRQARNGALYTLNGRINISNTRFKADFSPIDAACDCYTCQHYTRAYVNHLFRAD
EILGATLASIHNERFVVRTVDQIRESIINGTFFAFKQQFLARYYGDKLPAGVSL
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggacactgcgcttacttttgacattacccgccgcttacccggtacgctagcgcgggcg
ggtgtcattcatacgccgcacggcgaaattcgcacgccggcatttatcgtgggcggcact
aaagcaacagtaaaagcgatcactcccgagcaaattcgcagctacggcggtcaggcggtg
ctagcgaacacgtaccacctgatgttgcgaccaggcgcagacattgtgcgagctggcggc
ggactgggttcattcatgaattgggacggaccaacatttaccgatagcggcgggtttcaa
gtattcagtctgggaatcgcatacaaaaaaggcattgacgcggtagcacacacacagaaa
ggaaacgccaagctggcggtggtgtcgcgcaaccaactggtaagagtaacagacgagggc
gcagagtttcgctcgcatattgacggtgcgaaactgctaatgacaccagagtcttcgatg
gaactgcaacatacaatcggcgcagacattcacatggcgttcgacgagttgactgcgcct
ctcgcctcacacgaaacaattgcggcagcgatgaaccggacacacgcctgggcggagcgc
tgtttgaaacgccactcggacctcaatatggagcatacggagcgcggcgaaaatctacag
gcgctctacggcgtcgtgcaaggcgcgcgcgacaaagccttacggcgcgaatcagccgca
tttttaggggcgcgcaagttcgacggttacggcatcggcggcgtatttgagccaggcgaa
atctcaagcgtcgttcgctgggtgtgcgagacgctgccggcagaaaagccgcgccatcta
ctcggcatggggtcgcagccagcggacttattcctaggcgtagaatatggtattgataca
tttgattgcgtagcgccaacccgccaagcgcgcaacggtgcgctctacacgctcaatggt
cgcatcaatattagcaacacgcgcttcaaagcagatttttcgccaattgacgccgcatgc
gattgctatacctgccagcattacactcgcgcttacgtcaatcacttattccgcgccgat
gaaattctaggcgcgacgctcgcaagtatccacaacgaacgtttcgtcgtacgaacagtc
gaccaaattcgcgaatcaattatcaacggcacattttttgcattcaaacaacaattcctg
gcgcgctattacggcgacaaattaccggcaggcgtatcgttatag
DBGET
integrated database retrieval system
