Candidatus Southlakia epibionticum: SEML1_0583
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Entry
SEML1_0583 CDS
T11187
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
sepb Candidatus Southlakia epibionticum
Pathway
sepb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sepb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SEML1_0583
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sepb01007
]
SEML1_0583
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sepb03016
]
SEML1_0583
Enzymes [BR:
sepb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
SEML1_0583
Amino acid related enzymes [BR:
sepb01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SEML1_0583
Transfer RNA biogenesis [BR:
sepb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SEML1_0583
Prokaryotic type
SEML1_0583
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
tRNA-synt_2b
tRNA-synt_2
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
WIO46202
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All DBs
Position
complement(555216..556523)
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AA seq
435 aa
AA seq
DB search
MSKITTPRLPSGFNEYLPAEQIEFNRLLGIIRTVYERYGFAPLDTPDIELSEVLLAKGGG
ETEKQIYRFERGKNDLSLRFDLTVPLARYVAQHQGELAFPFRRYQIGKVHRAERAQAGRF
REFYQCDIDVIGSDSSVVDAEFPAIINEIFEQFDFGEFTIRINNRKVLNGFFEELGLSAA
ATDVLRIIDKIEKISRGDLVAELHDAGCSGEQVARLLEFITIQGENDEILHKLEMVGINN
EQFQAGARELHEVLTALRAMHVPERRVKLDLTITRGLDYYTGTVYETSLNDHSEVGSVCS
GGRYDNLTANYSKRSLPGVGISIGLSRLFYKLREAGIIKPAQQTLARVMVAPLSPVQLAR
ALDAAHELRAVCPVITYVDDVAIGKKLKYADKLGVRYAVLIGEDEAAAGDVTLKDMQTGE
NRRMPVRNVCDLLQA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagattacgacgccgcgtttgccgagcgggtttaatgaatatttgccggcggaa
cagattgagtttaaccgattgctggggattatccgcacggtgtatgagcgctatggtttc
gcgccgcttgatacgccagacatcgaactgagcgaggtgttgctcgccaaaggcggcggc
gagaccgaaaagcagatttatcggtttgaacgcggtaaaaacgatttaagcctgcgattt
gatttaacggtaccgcttgcgcgctatgttgcgcagcatcaaggcgagctggcgtttccg
tttcgacgctatcagattggcaaagtgcaccgcgcggagcgggcgcaggcggggcgattc
cgcgagttttatcagtgcgatattgatgtaatcggcagcgatagttcggtggtagatgcg
gaatttccggcgatcatcaatgagattttcgagcagtttgattttggcgagtttacgatc
cgtatcaataaccgtaaagtgctaaatggattttttgaggaacttggcttgagtgcggcg
gcgactgacgtgctgcggattatcgacaaaattgaaaaaatcagccgcggcgatttggtg
gctgagttgcacgatgctggttgcagcggcgagcaagttgcgcgcttgttagagtttatt
acgattcagggcgagaatgacgaaattctgcacaaacttgaaatggttggcatcaataac
gaacaattccaggcgggcgcgcgtgaattgcatgaggtgctgacagcgctgcgtgcaatg
catgtgccggagcgccgcgtgaagcttgatttgacaattacgcgcggtttggactattac
accggtacggtgtacgaaacgagtttgaacgaccactcagaggtcggcagcgtgtgttcg
ggcgggcggtatgataatctgacggcgaattattccaagcggtcgttgccgggcgtgggg
atctcgatcggcctgtcgcggttgttctataaattgcgcgaagcggggattattaagccg
gcgcagcaaacgcttgcacgcgtgatggtggcgccgcttagtcccgtacagttggcgcgc
gcgcttgatgcggcgcatgaactgcgcgcggtgtgtccggtgataacgtacgttgatgat
gtcgcaatcggtaaaaagttgaaatatgccgataaacttggcgttcgctacgcagtgctg
atcggcgaagatgaagcagcggcgggcgacgtaacgctaaaagatatgcagacgggcgag
aatcgccgcatgccggtgcgcaatgtttgcgatctgctgcaagcgtaa
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