Candidatus Southlakia epibionticum: SEML1_0688
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Entry
SEML1_0688 CDS
T11187
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sepb Candidatus Southlakia epibionticum
Pathway
sepb00260
Glycine, serine and threonine metabolism
sepb00460
Cyanoamino acid metabolism
sepb00630
Glyoxylate and dicarboxylate metabolism
sepb00670
One carbon pool by folate
sepb00680
Methane metabolism
sepb01100
Metabolic pathways
sepb01110
Biosynthesis of secondary metabolites
sepb01120
Microbial metabolism in diverse environments
sepb01200
Carbon metabolism
sepb01230
Biosynthesis of amino acids
sepb01240
Biosynthesis of cofactors
sepb04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sepb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SEML1_0688
09102 Energy metabolism
00680 Methane metabolism
SEML1_0688
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SEML1_0688
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SEML1_0688
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SEML1_0688
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SEML1_0688
Enzymes [BR:
sepb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SEML1_0688
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WIO46292
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Position
664877..666151
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AA seq
424 aa
AA seq
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MNDDIVATLIDGEAKRQREGLELIPSENYVSHSVRQALGSVFTNKYSEGYPGHRYYGGQE
FTDKVEQLAIDRAKRLFHADHANVQPHSGAPANEAVYSAWCRPGDTILAMDLSHGGHLTH
GSPVTRSAQLYNFVPYKMKDPATGEIDYDEIRRLAQQHQPKIILAGFSAYPRELDWAKFA
EIGRQIPDCLLMADVAHIAGLIAGGAAENPLKHGFHVMTTTTHKTLRGPRGGLILSMGTV
SSPLKKPAKTLANIPTLIDRAVFPGMQGGPHMNTIAAKAVAFGEALQPEFREYARNIVAN
AARLADELRQRGFVLVTGGTSNHLILADVHKSFGIDGKAAEQAIDKIGLTLNANAVPDDP
LPMFRPSGIRLGTPALTTRGCTPSDMPQIAEWMKQAIDARDDDTALAKLRSEVREFCLNL
KNMS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgatattgttgcgacacttatcgacggcgaagcaaaacgccaacgagaagga
ttagagctaatccctagcgaaaactacgtcagccactcggtgcggcaagcactcggcagc
gtgtttacaaacaaatatagcgaaggttaccccggacaccgttactacggcggacaggag
tttaccgacaaggttgaacagcttgccattgaccgcgccaagcgattattccacgccgac
cacgccaacgtacagccgcatagtggcgcaccagcaaacgaggcggtgtatagcgcatgg
tgccgcccgggcgatacaattttagcaatggatttgagccacggcgggcatctcacgcac
ggctcacccgtcacacgtagtgcacagttgtataattttgtaccatacaagatgaaagat
cctgcgacgggcgaaattgattacgacgaaattcgccgcctagcgcagcagcaccagcca
aagattattttggcgggctttagcgcttatccgcgcgaattggattgggcgaagttcgcc
gaaatcgggcgccaaattccggactgcttactgatggcagatgtagcgcatatcgccggg
ctaatcgctggcggcgcggcggagaacccgctgaaacacggtttccacgtcatgactacg
accacgcacaaaacgttacgcggaccgcgcggcggactgattttaagtatgggcacggta
agcagcccgctcaaaaaacccgccaaaacgctagcaaacattcctacgctgattgaccga
gcggttttccctggcatgcagggcggaccgcacatgaacaccatcgccgccaaagcggtg
gcgtttggcgaggcgctgcagccggagtttcgggaatacgcgcggaatatagtagcgaac
gccgcccggctggcagacgaactgcgccagcgcggcttcgtgctggtgacaggcggcacg
agcaatcacttgattttggcggacgtgcacaaaagtttcggtatagacggcaaggcggcg
gagcaggcgatagacaaaatcgggctgacactaaacgccaacgctgtgccagacgacccg
ctgccgatgtttcgccccagcggcatccgcctcggtacgccagccctaactacgcgcggc
tgcacgccgagcgacatgccgcaaatcgccgaatggatgaagcaagcgatagacgcgcgc
gacgacgatacagcgctcgcgaaactgcggagcgaggtgcgggagttttgcttaaacttg
aaaaatatgagttaa
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