Candidatus Southlakia epibionticum: SEML1_0798
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Entry
SEML1_0798 CDS
T11187
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sepb Candidatus Southlakia epibionticum
Pathway
sepb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sepb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SEML1_0798 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sepb03019
]
SEML1_0798 (groL)
03110 Chaperones and folding catalysts [BR:
sepb03110
]
SEML1_0798 (groL)
03029 Mitochondrial biogenesis [BR:
sepb03029
]
SEML1_0798 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sepb04147
]
SEML1_0798 (groL)
Enzymes [BR:
sepb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SEML1_0798 (groL)
Messenger RNA biogenesis [BR:
sepb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SEML1_0798 (groL)
Chaperones and folding catalysts [BR:
sepb03110
]
Heat shock proteins
HSP60 / Chaperonin
SEML1_0798 (groL)
Mitochondrial biogenesis [BR:
sepb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SEML1_0798 (groL)
Exosome [BR:
sepb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SEML1_0798 (groL)
Exosomal proteins of other body fluids (saliva and urine)
SEML1_0798 (groL)
Exosomal proteins of breast cancer cells
SEML1_0798 (groL)
Exosomal proteins of colorectal cancer cells
SEML1_0798 (groL)
Exosomal proteins of bladder cancer cells
SEML1_0798 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
GTP-bdg_M
Motif
Other DBs
NCBI-ProteinID:
WIO46395
LinkDB
All DBs
Position
complement(763294..764928)
Genome browser
AA seq
544 aa
AA seq
DB search
MAKKVFYDEDARRRVLGGAAVLYNAVKTTMGPKGRNVVVGKSYGGPSVTHDGVTVAKSID
IADVDDETLGFKVGAELIKQAANKMNDVAGDGTTTVTVLTYHILHEANKLIAAGHNPMLL
RKGLERAAVEITKELTKLSEDIKGDKKRVAEVATISAGDEAIGALIADVMDKIGPNGIVT
VEEGRGLELESEVVEGFTVQRGFISPYMVTDPKRMEAVYDKPAVVVTDKKVSSAQEFVPL
LEMIAQSGKKDLVLIADDVDGEALSLLVLNRLKGSFNTLAIKAPSDKDVLYDIAALVGAK
VITDDTGMAFDNVGSDVIGSARKVIATKDVTTIVEGAGSKSEVQARVDQIDVQVEETSSD
YTRNNLLKRQAALTGEVAVIKVGGATETEIEEKKYRVDDAVAAVKAALAEGIVPGGGVTL
VDLAGNYKYAGSKDASVAAGEKLLVNALEQPFRILLANSGLNADEWLPQVRKAKAGQGID
VNHPTELIDLKKSGVVDPVRVTKEALQNAASIAGTAMTMGALVVDVPEKEAPSTPDMGGM
GGYM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaaagttttttacgatgaagatgcacgtcgccgcgtgttaggcggagcggca
gtactatataacgcagtcaagactacgatgggtccgaaagggcgtaacgttgtagtcggg
aaaagttatggtggtccaagtgtgacgcacgacggtgtaacggtggcgaagagtattgac
atcgctgatgtcgatgatgaaacgcttggttttaaggtcggtgctgagctgattaaacaa
gccgccaacaagatgaatgacgtcgcgggcgacggtacgacaacggtgacagtattgacc
tatcatattctgcacgaagcgaacaaattgattgccgccggacacaatccgatgctgctg
cgcaaaggattggagcgcgctgcggttgaaattactaaagaattgactaaattatcggaa
gacattaaaggcgataaaaagcgcgtagcggaagttgcgacgatttcggcgggcgacgaa
gcgattggcgcgctgatcgccgatgtgatggacaagatcggcccaaatggtatcgtgaca
gttgaagaagggcgcggtctggaattggaaagcgaagtcgttgaaggctttacagtgcag
cgcgggttcatcagtccatacatggtgactgatccaaagcgcatggaagcagtgtatgac
aagccggcggttgtggtgactgacaagaaagtttcgtcagcgcaagaatttgtgccgttg
cttgagatgattgcgcaaagcggtaagaaggatttggtgctgattgctgatgatgtagat
ggcgaagcacttagcttgctggtgctgaaccgtttgaaaggttcgttcaacacgctcgcg
atcaaagcgccgagcgacaaagatgtactgtatgacatcgcggcattggttggtgcaaaa
gttattactgacgacacaggcatggcgtttgacaacgttggcagcgacgtgatcggttca
gcgcgtaaagttatcgctacaaaagacgtgacgacgatcgttgaaggcgcaggcagcaag
agtgaagtgcaggcgcgcgtcgaccaaattgacgtacaagttgaagagacgtcaagcgac
tacacgcgcaataacctgctaaagcgccaggcagcgttgacgggcgaagttgcagtgatt
aaggttggtggtgcgactgagacggaaattgaagagaagaaatatcgcgtcgacgacgcg
gtcgcagcagttaaggcagcgcttgccgagggaatcgtgccgggcggcggcgtgacgctg
gttgatttggctggcaactacaaatatgcaggcagtaaagacgcgtcggtcgcggcaggc
gagaagttgcttgtaaatgcgttggagcagccgttccgtattctgcttgcaaactccggt
ttgaacgctgacgagtggttgccacaagtgcgtaaggctaaggcagggcagggtattgac
gtgaatcacccgaccgagctaattgacctaaagaagagcggtgtcgttgatccggtgcgc
gtcacgaaagaggcattgcagaatgccgcctcaatcgccggtacggcaatgacaatgggc
gcattagtggttgatgtgccggaaaaagaagctccaagtacgccggacatgggcggtatg
ggcggatacatgtag
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