Staphylococcus epidermidis PM221: SEB_00819
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Entry
SEB_00819 CDS
T03289
Name
(GenBank) Succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
sepp
Staphylococcus epidermidis PM221
Pathway
sepp00020
Citrate cycle (TCA cycle)
sepp00190
Oxidative phosphorylation
sepp00650
Butanoate metabolism
sepp00720
Other carbon fixation pathways
sepp01100
Metabolic pathways
sepp01110
Biosynthesis of secondary metabolites
sepp01120
Microbial metabolism in diverse environments
sepp01200
Carbon metabolism
Module
sepp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sepp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sepp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SEB_00819
00650 Butanoate metabolism
SEB_00819
09102 Energy metabolism
00190 Oxidative phosphorylation
SEB_00819
00720 Other carbon fixation pathways
SEB_00819
Enzymes [BR:
sepp01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SEB_00819
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
GIDA
FAD_oxidored
AlaDh_PNT_C
NAD_binding_8
DAO
Motif
Other DBs
NCBI-ProteinID:
CDM13379
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All DBs
Position
821608..823374
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AA seq
588 aa
AA seq
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MAEKKIIVVGGGLAGLMSTIKAAEQGAHVDLFSIVPVKRSHSVCAQGGINGAVNTKGEGD
SPWIHFDDTVYGGDFLANQPPVKAMADAAPKIIHLLDRMGVMFNRTKEGLLDFRRFGGTL
HHRTAFAGATTGQQLLYALDEQVRSFEVDGLVTKYEGWEFLGIVKDEEDAARGIVAQNMT
TSEIQSFGSDAVIMATGGPGIIFGKTTNSMINTGSAASIVYQQGAIYANGEFIQIHPTAI
PGDDKLRLMSESARGEGGRIWTYKDGKPWYFLEEKYPDYGNLVPRDIATREIFDVCINQK
LGINGENMVYLDLSHKDPHELDVKLGGIIEIYEKFTGDDPRKVPMKIFPAVHYSMGGLYV
DYDQMTNIKGLFAAGECDFSQHGGNRLGANSLLSAIYGGTVAGPNAIKYVENVEKSYTDL
DDSIFEARVKEEKERFDHLLNMRGTENAYKLHRELGEIMTANVTVVRENEKLLETDKKIQ
ELMKRYEDIDMEDTQTWSNQAVFFTRQLWNMLVLARVITIGAYNRNESRGAHYKPEFPER
NDEEWLKTTMARYKGRSEKPEFTYEPVDVSLIPPRKRDYTSKSKGGNK
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaaaaaaattattgttgtcggtggaggactagctggtctgatgtcaacaatt
aaagcggcagaacaaggtgcacatgtagatttattttccattgtaccggtaaagcgttcg
cactctgtttgtgcacaaggtggcataaatggtgctgttaatactaaaggtgagggagat
tcaccgtggattcactttgatgatactgtttatggtggagacttcctggctaatcaacca
ccagtcaaagcaatggctgatgctgcacctaaaatcatccatctgttagatcgtatgggg
gttatgtttaacagaacgaaagaaggcttattagactttagacgttttggcggtacacta
catcatagaacagcttttgctggcgcaacgacaggtcaacaattgctttatgcattagat
gagcaagttcgttcatttgaggtagatggtttagtaactaaatacgaaggatgggaattt
ctaggtattgttaaagacgaagaagatgctgcaagaggtattgtcgctcaaaatatgaca
acatcagaaattcaatcattcggttcagatgctgtcatcatggcaacaggtggccctggt
attatctttggtaaaacgacgaattcaatgattaatacaggttcagcggcgtcaatcgtt
tatcagcaaggtgcgatttatgcaaatggtgaattcatccaaatacatccgactgcgatt
cctggagatgacaaattacgtcttatgagtgaatcagctcgtggtgaaggtggacgtatt
tggacgtataaagatggtaaaccttggtacttcttagaagaaaaatatccagactatggt
aacttggttccacgtgatatagcgacacgtgaaattttcgatgtttgtattaaccaaaag
ttaggtatcaatggagaaaacatggtataccttgatttatctcataaagatccacacgaa
ttggatgttaaattaggtggtattattgaaatttatgaaaaattcacaggtgatgatcca
cgtaaagttccaatgaaaatcttcccagcagtgcattattcaatgggtggtttatacgta
gactatgatcaaatgactaatatcaaagggttatttgcagctggagaatgtgatttctca
caacatggtggtaaccgtttaggtgccaattctttactttcagctatttatggaggtaca
gtagcaggtcctaacgctatcaaatatgttgaaaatgttgaaaaatcgtatacagatcta
gatgacagtattttcgaagctcgtgttaaagaagagaaagaaagatttgatcatttatta
aatatgcgtggaactgaaaatgcttataaacttcaccgtgaattaggtgaaattatgaca
gctaacgtaactgtagttcgtgaaaatgaaaagttgcttgaaacagataaaaaaattcaa
gagcttatgaaacgttatgaagatatcgatatggaagatacgcaaacatggagcaaccaa
gcagtattcttcacacgacaattatggaatatgttggttcttgctcgtgtgattacgatt
ggtgcatataatcgtaacgaatctagaggtgcacattacaaacctgaattcccagaacgt
aatgatgaagaatggttaaaaacaaccatggctcgttataaaggtagaagtgaaaagcca
gaatttacttatgagccagtagatgtaagtttaattccacctcgtaagcgtgactacaca
agtaagtctaaaggaggtaataagtaa
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