KEGG   Staphylococcus epidermidis PM221: SEB_00888
Entry
SEB_00888         CDS       T03289                                 
Name
(GenBank) Ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
sepp  Staphylococcus epidermidis PM221
Brite
KEGG Orthology (KO) [BR:sepp00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    SEB_00888
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sepp03019]
    SEB_00888
   03009 Ribosome biogenesis [BR:sepp03009]
    SEB_00888
   03036 Chromosome and associated proteins [BR:sepp03036]
    SEB_00888
Enzymes [BR:sepp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     SEB_00888
Messenger RNA biogenesis [BR:sepp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SEB_00888
Ribosome biogenesis [BR:sepp03009]
 Eukaryotic type
  90S particles
   RNase
    SEB_00888
 Prokaryotic type
  rRNA processing factors
   SEB_00888
Chromosome and associated proteins [BR:sepp03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     SEB_00888
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DSRM_2
Other DBs
NCBI-ProteinID: CDM13447
LinkDB
Position
890781..891518
AA seq 245 aa
MANQKKKEMVHNFQQKFTDKMKSLGLHFKNIDLYQQAFSHSSFINDFNMNRLEHNERLEF
LGDAVLELTVSRYLFDRHPHLPEGNLTKMRATIVCEPSLVIFANKIKLNELILLGKGEEK
TGGRTRPSLISDAFEAFVGALYLDQGLDSVWTFAEKVIFPYVEDDELVGVVDFKTQFQEY
VHSQNKGDVTYQLIKEEGPAHHRLFTSEVILENKAVAEGKGKTKKESEQKAAEQAYKLMK
NKKSL
NT seq 738 nt   +upstreamnt  +downstreamnt
gtggctaaccagaaaaagaaagaaatggtacataattttcaacaaaaatttactgataaa
atgaagtcgttaggattacattttaaaaatattgatttatatcaacaggcattctctcat
tcaagttttattaatgactttaatatgaatcgtttagaacacaacgaacgcttagaattt
ttaggtgatgcggtattagaattgacggtttcacgctatctttttgacagacatcctcat
ttaccagaaggtaatttgacaaagatgcgcgcaacaattgtttgtgaaccttcacttgtg
atatttgcgaataaaattaaattaaacgaactgattttattaggtaaaggtgaagagaag
acaggaggcagaacaagaccttcccttatttcagatgcatttgaagcttttgtaggtgca
ctatatttagatcaaggtttagattcagtatggacatttgctgaaaaagtcatctttccg
tatgtagaagatgacgagcttgttggtgtcgtagactttaaaacacaattccaagaatat
gtgcatagccaaaataaaggagatgtgacataccaattaattaaagaagagggtcccgca
catcatagactatttacatcggaagtgattttagaaaataaagcagttgcagagggtaaa
ggaaagacaaagaaagaatccgaacaaaaggcagcagaacaagcgtataaactaatgaaa
aataaaaaatcattataa

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