Staphylococcus epidermidis PM221: SEB_00927
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Entry
SEB_00927 CDS
T03289
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sepp
Staphylococcus epidermidis PM221
Brite
KEGG Orthology (KO) [BR:
sepp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sepp03016
]
SEB_00927
Enzymes [BR:
sepp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SEB_00927
Transfer RNA biogenesis [BR:
sepp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SEB_00927
Prokaryotic type
SEB_00927
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF3718
Motif
Other DBs
NCBI-ProteinID:
CDM13486
LinkDB
All DBs
Position
938312..939229
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AA seq
305 aa
AA seq
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MYNGILPVFKERGLTSHDVVFKLRKILKMKKIGHTGTLDPEVNGVLPICLGDATKVSDYI
MEMGKTYHAMITLGKSTTTEDQTGDILKTRAVDKNDINEDTIDQVLQQFEGHIQQVPPMY
SSVKVNGRKLYEYARNNETVERPKRQVFIKDIHRISEVTFQEQTCHFEVEVTCGKGTYIR
TLATDIGLKLGFPAHMSRLTRIASGGFQLESSLTIDQIKELHEHDSLHNELFPIEYGLKG
LKSFQVKDSNFKKKICNGQKFHKKVLSQDVKEPFIFVDSSTQKVLAIYIVHPDKPYEIKP
KKVFN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtataatggcatactaccggtatttaaggaacgaggtttaacaagtcacgacgtcgtt
tttaaattacgtaaaattttaaaaatgaaaaaaattggtcatacaggaacattagatcct
gaagttaatggtgtgttaccaatttgtttaggcgatgcgacaaaagtcagtgattatatc
atggaaatgggaaaaacttatcacgctatgataacgctaggaaagagtacgactactgaa
gaccaaactggagatattttaaaaactagggctgttgataagaatgatattaatgaagat
acgattgaccaagtgttgcagcaatttgaggggcatattcaacaagttccgcctatgtat
tcttctgttaaagtaaatggaagaaaattatatgaatatgcgagaaataatgaaactgtc
gaacgccctaaacgacaagtttttattaaagatatacatagaatatctgaagttactttt
caggagcagacatgtcattttgaagttgaagtaacatgtggtaaaggaacttatattaga
actttagctacagatattggacttaaacttggttttccagctcatatgtcacgtctaact
agaattgcttcaggcggttttcaattagaaagtagtttaacgattgatcaaattaaagaa
ttacatgagcatgattcattacataatgaattgtttcctatagaatatggcttaaaaggt
ctgaaatcattccaagtgaaagattcaaattttaaaaagaaaatctgtaacggtcaaaaa
tttcataaaaaagtgttaagtcaagatgttaaagaaccttttatatttgtcgatagtagc
actcaaaaagttttagcaatttatatagttcatccagataaaccttatgaaataaaacct
aaaaaagtttttaattaa
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