Staphylococcus epidermidis PM221: SEB_00952
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Entry
SEB_00952 CDS
T03289
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
sepp
Staphylococcus epidermidis PM221
Pathway
sepp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sepp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SEB_00952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sepp03400
]
SEB_00952
DNA repair and recombination proteins [BR:
sepp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SEB_00952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_14
ZW10_C2
AAA_29
DUF7853
nSTAND_NTPase5
Spuma_A9PTase
Motif
Other DBs
NCBI-ProteinID:
CDM13511
LinkDB
All DBs
Position
966772..969297
Genome browser
AA seq
841 aa
AA seq
DB search
MFFDDAKEASRVLEITLTKRDAKKENPIPMCGVPYHSADNYIETLINKGYKVAICEQMED
PKQTKGMVRREVVRIITPGTVMDQNGMDEKKNNYILSFIENEEFGLCYCDVSTGELKVTH
FKDTATLLNEITTINPNEIVIKQALSEELKRQINMITETITVREDISDEDYDMNQLTHQL
MHDTTQLLLDYIHHTQKRDLSHIEEVIEYAAVDYMKMDYYAKRNLELTESIRLKSKKGTL
LWLMDETKTPMGARRLKQWIDRPLINKQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDI
ERLVGRVSYGNVNARDLIQLKHSISEIPHIKALLNELGAQTTTQFKELEPLDDLLQILEE
SLVEEPPISIKDGGLFKNGFNAQLDEYLEASKNGKTWLAELQAKERERTGIKSLKISFNK
VFGYFIEITRANLNNFQPEAFGYNRKQTLSNAERFITDELKEKEDIILGAEDKAVELEYE
LFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYNYVKPTFSDDKVLHLENSRHP
VVERVMDYNDYVPNDCHLDDETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCDSA
TLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFDEIGRGTSTYDGL
ALAQAMIEYVAQTSHAKTLFSTHYHELTSLDQMLKCLKNVHVAANEYQGELIFLHKVKDG
AVDDSYGIQVAKLADLPNEVIDRAQVILNAFEQKPSYQLSHENTDNQQTVPSYNDFGRTE
EEQSVIETHTSNHNYEQATFDLFDGYNQQSEVECQIRELNLSNMTPLEALIKLNELQSQL
K
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgttctttgatgatgctaaagaagcatcaagagtacttgaaataacattgacgaaaaga
gatgctaaaaaagaaaatcctattccgatgtgtggcgtaccatatcattctgctgataat
tacattgaaacattgattaataaggggtataaggtcgctatatgtgaacaaatggaagat
ccaaagcaaacaaaaggaatggttagaagagaagttgtaagaatcatcacaccaggaact
gttatggatcaaaatggtatggatgaaaagaaaaataattatattttaagttttatcgaa
aatgaagaatttggattatgctattgtgatgtttctacaggagaactcaaagtaactcat
ttcaaagatacagcaaccttgcttaatgagattacaacaattaatcccaatgaaatcgtc
ataaagcaagctctatctgaagaattaaaaagacaaatcaacatgataactgagacgatt
actgttcgcgaagatatatctgatgaagattatgatatgaatcagttgacacatcagtta
atgcatgacacaactcaattattgttagattacattcatcacacacaaaagcgagattta
tctcatattgaggaagtaattgaatatgctgcagttgattatatgaagatggattattat
gcgaagcgaaatttagagctgacagagagcatacgattaaaatcaaaaaaagggactttg
ttatggttaatggatgagacaaaaacaccgatgggtgctagacgtttaaagcagtggatt
gatcgtccattaattaataaacaacaaatcaacgacagattaaatattgttgaagagttt
atggaccgttttattgaaagagatacattacgtaatcatttaaatcaagtgtatgacata
gaacgactagtaggaagagtgagttatggaaacgtaaatgcaagagatttaatacaactt
aagcattctatatccgaaatacctcacattaaagcattactcaatgaattgggtgcacaa
actaccacgcaatttaaagaattagaacctttagatgacttgttacaaattttagaagaa
agtttagttgaagaaccacctatttccatcaaagatggaggattatttaaaaatggcttc
aacgcgcaacttgatgaatatttagaagcttcaaaaaatggtaaaacttggcttgcagaa
ttacaagctaaggaacgtgaacgtacaggtattaagtcattgaaaattagttttaataaa
gtgtttggttattttattgaaattacacgtgcaaacttaaataattttcaacctgaagcg
tttggctataatcgaaaacaaacattatctaatgctgaacgatttattacggatgaatta
aaagaaaaagaagatataatacttggtgctgaagataaagcagtagagttagaatatgaa
ttatttgttaaattacgagaacacattaaaacgtacactgaacgtttacaaaagcaagcg
aaaatcatttcagaacttgattgtttacaaagttttgctgaaattgctcaaaaatataat
tatgtcaaacctacatttagtgatgataaagttttacatttagaaaactcaagacatcct
gttgttgagagagtgatggattataatgattatgtacctaatgattgccatcttgatgat
gaaacgtttatttatctcattacgggacctaatatgtcaggtaagtcaacatatatgaga
caagttgctataataagtatcatggctcaaatgggagcatatgtaccatgtgattcagca
acattacctatatttgatcaaatttttactaggattggtgcagcagatgatcttgtatca
ggtaaaagtacatttatggtagaaatgttagaagctcaaaaagctttaacttatgctact
gaaaatagtttaattatctttgacgaaataggaagaggtacatccacttatgatggtctt
gcgttagcgcaagcgatgattgaatatgttgctcaaacttcccatgctaagacacttttc
tcaacacattatcatgaattgacatcacttgatcaaatgcttaagtgtttaaaaaatgta
catgttgctgcaaacgagtatcaaggtgaactgatatttttgcataaagtcaaagatggc
gctgtggatgatagctatggtattcaagtggcaaaattagcggatttacctaatgaagtc
attgatagagcgcaagttatattaaatgcatttgagcaaaaaccttcgtatcaactctct
catgagaatactgacaatcaacaaacggttccgtcgtataacgattttggtcgaacagaa
gaagagcaatcagttatagaaacacatacatcaaatcataattatgagcaagcgaccttt
gatttatttgatggttacaatcaacaaagtgaagttgaatgtcaaattcgagaattgaat
ctatccaatatgacaccattggaagccttaatcaagctgaatgaattacaaagtcaatta
aagtag
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