Staphylococcus epidermidis PM221: SEB_01222
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Entry
SEB_01222 CDS
T03289
Name
(GenBank) Geranyltranstransferase (farnesyldiphosphate synthase)
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
sepp
Staphylococcus epidermidis PM221
Pathway
sepp00900
Terpenoid backbone biosynthesis
sepp01100
Metabolic pathways
sepp01110
Biosynthesis of secondary metabolites
Module
sepp_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
sepp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SEB_01222
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sepp01006
]
SEB_01222
Enzymes [BR:
sepp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
SEB_01222
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
SEB_01222
2.5.1.29 geranylgeranyl diphosphate synthase
SEB_01222
Prenyltransferases [BR:
sepp01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
SEB_01222
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
CDM13777
LinkDB
All DBs
Position
complement(1258261..1259043)
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AA seq
260 aa
AA seq
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MKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALALEMIHTYSLIHDDLPAMDNDDYR
RGKLTNHKVYGEWKAILAGDALLTKAFELVSNDTTIEDSVKVSIIKRLSKASGHLGMVGG
QALDMESEGKSIRLETLESIHETKTGALLNFSVMAAVDIAQVEQNIAKNLDEFSHHLGMM
FQIKDDLLDVYGDESKLGKKVGSDIVNHKSTYVSLLGKEGAEEKLNNHQYLAMNCLNQIS
DQYDTSELSDIVDLFYNRDH
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaaatattcattaaatgctggtggtaaaagaatcagaccagtcatattattattaaca
ctaaaaatgcttaacaaagattatcaacaaggactaaatagtgctttagcattggaaatg
attcatacttattctttaattcatgatgatttaccagcaatggataatgacgattaccgt
agaggaaaattaacaaatcataaagtttatggtgaatggaaagccattcttgctggtgat
gcattattaacaaaagcttttgaattagtttctaatgatactaccattgaagatagtgtg
aaagtaagtattataaaaagactttcaaaagcaagtggacatttgggaatggtgggtggc
caagcgcttgatatggaaagtgaagggaagtcaattcgtttagaaactttagaatcaatt
catgaaactaagacaggcgctttactaaatttttcagttatggctgcggtagacattgct
caagtagaacaaaatattgctaagaatttagatgaatttagtcatcatttaggaatgatg
tttcaaattaaagatgatttactggatgtgtatggtgatgaatcaaaacttggcaaaaaa
gtaggcagtgatatagtaaatcataaaagtacttatgtttctttacttggaaaagaagga
gcagaagaaaagttaaacaatcatcaatatcttgctatgaactgcttaaatcaaatttct
gatcaatatgatacttctgaattaagtgatattgtagatttattctataacagagaccat
taa
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