Staphylococcus epidermidis PM221: SEB_01223
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Entry
SEB_01223 CDS
T03289
Name
(GenBank) Exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
sepp
Staphylococcus epidermidis PM221
Pathway
sepp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sepp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SEB_01223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sepp03400
]
SEB_01223
Enzymes [BR:
sepp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SEB_01223
DNA repair and recombination proteins [BR:
sepp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SEB_01223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
DUF2120
DUF1657
Vps35
HEAT_SCC3-SA
KxDL
DUF2209
DMPK_coil
HU-CCDC81_bac_2
MTR4_beta-barrel
Motif
Other DBs
NCBI-ProteinID:
CDM13778
LinkDB
All DBs
Position
complement(1259120..1259350)
Genome browser
AA seq
76 aa
AA seq
DB search
MSKEKQSFEEMMKELENIVQKLDNEAVSLEESLDLYQRGMKLSANCDSTLKEAEKKVNEL
MQEEVGDKGNEETTDE
NT seq
231 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagaaaagcaaagtttcgaagaaatgatgaaagaacttgaaaatatcgttcaa
aaattggataatgaagcagtttctttagaagaatccctcgatttataccaacgtggtatg
aaactatctgctaattgtgattcaactttaaaagaagcagagaaaaaagtgaatgaatta
atgcaagaagaagttggtgataaaggaaatgaagaaactacagatgaataa
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