Staphylococcus epidermidis PM221: SEB_01518
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Entry
SEB_01518 CDS
T03289
Name
(GenBank) Similar to ribosomal large subunit pseudouridine synthase D, Bacillus subtilis YhcT type
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
sepp
Staphylococcus epidermidis PM221
Brite
KEGG Orthology (KO) [BR:
sepp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sepp03009
]
SEB_01518
Enzymes [BR:
sepp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
SEB_01518
Ribosome biogenesis [BR:
sepp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SEB_01518
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
RluD_N
Motif
Other DBs
NCBI-ProteinID:
CDM14062
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All DBs
Position
1559931..1560755
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AA seq
274 aa
AA seq
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MKFTIPKQFNDYTLREIFQYLKLPKKDLHQLNMSKEILINKEYGTLLNNVKTGDHVEIPT
PNEVSNYLPSYRYAQIYYEDDDLAIVMKPKGVKTHPNDLKESNTLMNHVIYTVDSEYVEP
IHRLDQETVGLLIVAKNPLMKKILDRMLEYNEITRIYKANVKALLPIKPQTIDMPIGKDK
FHSNKRRISNTGQRAITHIINSKMIKEGVCQLDIKLDTGRTHQIRVHLAEIGHPVIGDPL
YGTSTLRQLELNSHQIEFTHPLTQEIISVSLDDK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacaatacctaaacaatttaacgattatacattgagagagattttccaatat
ttaaaattacctaaaaaagacttacatcaactgaatatgtctaaagaaattttaattaat
aaagagtacggtacattattaaataatgttaaaactggtgatcatgttgagataccaacc
cctaatgaagtaagtaattatttaccaagttatcgatatgctcaaatttattacgaggat
gatgacttggccattgtcatgaaaccaaaaggtgttaaaacgcatcccaatgatttaaaa
gagagcaacacacttatgaaccatgtgatttacactgttgatagtgaatatgttgagccc
atacatcgactagatcaagaaacagtaggtttattgatagttgctaaaaatccgcttatg
aaaaaaatcttagaccgaatgttagaatataatgaaattacgcgtatatataaagcaaat
gtcaaagcgttgttacctattaagccacaaacgatagatatgcctattggtaaagataaa
tttcattcaaacaaacgaagaatttccaacacaggtcaacgtgcaatcactcacattatt
aactctaaaatgattaaagaaggtgtatgtcaactcgacattaaactagatacaggtcga
acacaccaaattcgtgtgcaccttgctgagattggccatccagttattggggatccactt
tatggaacttcaacattacgacaattagagctaaatagtcatcaaattgaatttactcat
ccactgactcaagaaattatttctgtaagtctagatgataaatag
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