Staphylococcus epidermidis PM221: SEB_01565
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Entry
SEB_01565 CDS
T03289
Name
(GenBank) DNA polymerase III polC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sepp
Staphylococcus epidermidis PM221
Pathway
sepp03030
DNA replication
sepp03430
Mismatch repair
sepp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sepp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SEB_01565
03430 Mismatch repair
SEB_01565
03440 Homologous recombination
SEB_01565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sepp03032
]
SEB_01565
03400 DNA repair and recombination proteins [BR:
sepp03400
]
SEB_01565
Enzymes [BR:
sepp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SEB_01565
DNA replication proteins [BR:
sepp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SEB_01565
DNA repair and recombination proteins [BR:
sepp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SEB_01565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CDM14107
LinkDB
All DBs
Position
1610444..1610998
Genome browser
AA seq
184 aa
AA seq
DB search
MVQNAFVALDFETANSKRTSICSVGMVKVIDNQITESFHTLVNPFDYFTETNITVHGIHP
EDVQDAPGFKHVYPYMLKFIDQLPVVAHNAAFDMNVLHQSLKSHNIDTPSLTYFCSYQLA
KRTINAYRYGLKHLMNHYHLDFHGHHDALNDAKACAMITYRLLKHYDDLQSMLSIYGKNL
KDKG
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggtacaaaatgcatttgttgcactggactttgaaactgctaacagtaaacgaacaagt
atttgctctgtaggtatggttaaagttattgataatcaaataacagagtcatttcatacc
cttgtgaatccttttgactactttactgaaacaaatattactgtacatggcatccatccc
gaagatgtgcaagatgctcctggattcaagcatgtctatccatatatgctaaaatttatt
gatcaacttcctgttgttgcccataatgctgcttttgatatgaatgtgttacatcaaagt
ttaaaaagtcataatatagatacaccttctttgacatacttttgttcatatcaattagct
aaacgaacaattaatgcatatcgatatgggctaaaacatttaatgaatcattaccattta
gattttcacggtcatcatgatgcgttaaatgatgctaaagcttgtgcaatgattacctac
cgcttattgaaacattatgatgatcttcaaagcatgttgagtatatatggaaaaaatctc
aaagataaaggctga
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