Staphylococcus epidermidis PM221: SEB_01643
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Entry
SEB_01643 CDS
T03289
Name
(GenBank) Heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sepp
Staphylococcus epidermidis PM221
Pathway
sepp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sepp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SEB_01643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sepp03019
]
SEB_01643
03110 Chaperones and folding catalysts [BR:
sepp03110
]
SEB_01643
03029 Mitochondrial biogenesis [BR:
sepp03029
]
SEB_01643
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sepp04147
]
SEB_01643
Enzymes [BR:
sepp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SEB_01643
Messenger RNA biogenesis [BR:
sepp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SEB_01643
Chaperones and folding catalysts [BR:
sepp03110
]
Heat shock proteins
HSP60 / Chaperonin
SEB_01643
Mitochondrial biogenesis [BR:
sepp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SEB_01643
Exosome [BR:
sepp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SEB_01643
Exosomal proteins of other body fluids (saliva and urine)
SEB_01643
Exosomal proteins of breast cancer cells
SEB_01643
Exosomal proteins of colorectal cancer cells
SEB_01643
Exosomal proteins of bladder cancer cells
SEB_01643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
CDM14184
LinkDB
All DBs
Position
complement(1680419..1682038)
Genome browser
AA seq
539 aa
AA seq
DB search
MAKDLKFSEDARQAMLRGVDKLANAVKVTIGPKGRNVVLDKDYTTPLITNDGVTIAKEIE
LEDPYENMGAKLVQEVANKTNEIAGDGTTTATVLAQSMIQEGLKNVTSGANPVGLRQGID
KAVQVAIEALHEISQKVENKNEIAQVGAISAADEEIGRYISEAMDKVGNDGVITIEESNG
FNTELEVVEGMQFDRGYQSPYMVTDSDKMIAELERPYILVTDKKISSFQDILPLLEQVVQ
SSRPILIVADEVEGDALTNIVLNRMRGTFTAVAVKAPGFGDRRKAMLEDLAILTGAQVIT
DDLGLELKDASLDMLGTANKVEVTKDHTTVVDGNGDENNIDARVGQIKAQIEETDSEFDK
EKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNI
YQKVSEIKAEGDVETGVNIVLQALQAPVRQIAENAGLEGSIIVERLKHAEAGVGFNAATN
EWVNMLEEGIVDPTKVTRSALQHAASVAAMFLTTEAVVASIPEPENNEQPGMGGMPGMM
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatcttaaattctctgaagacgcacgtcaagcaatgttacgtggcgttgat
aaattagcaaacgctgtaaaggttacaattggacctaaagggcgaaatgttgttctagat
aaggattatacaacacctttaattacaaacgacggtgtaacaattgctaaggaaatagag
ttagaagatccatatgagaatatgggtgcaaaattagtgcaggaagttgcgaataaaaca
aatgaaatcgctggggacggtacaactacagcaacagttttagcacaatcaatgattcag
gaaggtcttaagaatgttacaagtggtgcaaatcctgtaggcttaagacaaggtattgac
aaagcagtgcaagtggctatagaagcgcttcatgagatttctcaaaaggttgaaaataag
aacgagatagcgcaagttggagctatttcagcagcagatgaagaaatcggtcgctacatt
tctgaagcaatggataaagtaggtaacgatggcgttatcactattgaagaatcaaatggg
tttaatacagaattagaagtagttgaaggaatgcaatttgatcgtggttatcaatcacca
tatatggtaactgactcagataaaatgatagctgaattagaacgtccatatatattagta
acggataagaaaatttcatcattccaagatattcttccattattagaacaagttgtgcag
tctagtcgacctattttaattgttgcggatgaagtagaaggtgatgcgcttactaatatt
gttttaaaccgtatgcgcggaacatttactgctgtagcagttaaagctccaggatttggt
gatcgacgtaaagcaatgttagaagacctagcaatattaactggtgctcaagtcattact
gatgatttaggtttagaacttaaagatgcatctcttgatatgctaggtactgcaaataaa
gttgaagtgactaaagatcacacaacagtcgtagatggtaatggtgatgaaaataatatt
gatgctcgtgtaggtcaaattaaagcgcaaattgaagaaactgattcagagtttgataaa
gaaaaattacaggaacgtttagcaaaactagctggtggcgtagctgttatcaaagtaggg
gctgcaagtgaaacagaacttaaagaacgtaaactaagaattgaagacgcattaaattca
acacgtgcagcggtggaagaaggtatcgttgctggtggtggtactgcgttagtcaatata
tatcaaaaagtaagtgaaattaaagcagaaggtgatgttgaaacaggtgttaatattgtt
ttacaagcattacaagcacctgttagacaaattgctgaaaatgcaggattagagggttca
attattgttgaacgtttaaaacatgctgaagcgggcgttggtttcaatgcagcaacaaat
gaatgggttaatatgttagaagaaggtatagtagatccaactaaagtaactcgttcagcg
ttacaacatgcagcaagtgtagctgctatgttcttaacaactgaagcagtcgttgctagt
attccagagccagaaaataatgaacaacctggaatgggtggcatgccaggtatgatgtaa
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