Staphylococcus epidermidis SEI: DP17_1796
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Entry
DP17_1796 CDS
T03343
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
seps
Staphylococcus epidermidis SEI
Pathway
seps03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
seps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DP17_1796 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seps03019
]
DP17_1796 (recQ)
03400 DNA repair and recombination proteins [BR:
seps03400
]
DP17_1796 (recQ)
Enzymes [BR:
seps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DP17_1796 (recQ)
Messenger RNA biogenesis [BR:
seps03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DP17_1796 (recQ)
DNA repair and recombination proteins [BR:
seps03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DP17_1796 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HRDC
RecQ_Zn_bind
Cas3-like_C_2
GH123_cat
Motif
Other DBs
NCBI-ProteinID:
AIR83530
LinkDB
All DBs
Position
1893247..1895025
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AA seq
592 aa
AA seq
DB search
MQETLSHYFGYKSFRPGQEEIITKILNHQHTLGVLPTGGGKSICYQVPGLMQGGTTIVIS
PLISLMKDQVDQLQAMGIQAAYLNSSLTHKQQKEIEEQIKRGAIQFLYVAPERFENTFFL
NLLRKIEIPLIAFDEAHCISKWGHDFRPSYQSVIQKVFTLPQNFTIVALTATATAEVQQD
IMSKLSIGQNDVVKTSTKRRNLIFKVNPTYQRQKFVVDYVANHEGQAGIIYCSTRKQVEE
LHEALNSEKIKSTIYHAGLTNKERIEAQSDFLYDRVEIVIATNAFGMGIDKSNVRYVIHY
NMPGDLESYYQEAGRAGRDGLKSECILLFSERDKGLHEYFITVSQADDDYKDKMGEKLTK
MIQYTKTKKCLEATIVHYFEPNENLEECNQCSNCIQENKTYDMTREAKMIISCIARMKQQ
ENYSVIIQVLRGEVTDYIKHYHYNELTTHGLMKNYTTSELSHLIDELRFKGYLNENDEIL
MCDTSVKQLLNNYTKVYTTPFKQKTKEKVFINTVEGVDRALYRELVDVRKQLSDKLGIAP
VSIFSDYTLEEFAKRKPESKQEMIAIDGVGSYKLKHYCPKFIETIQSYKTRI
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagactttatcgcattattttggttataagtcatttcgaccaggacaagaagaa
attataactaaaatattaaatcatcagcatacactgggggtactacctaccggtggcggt
aaatcgatatgctatcaagtaccaggtttaatgcagggtggcacaactattgttataagt
ccacttatttctttgatgaaagaccaagttgatcaactacaagcaatgggaattcaagct
gcatatttgaatagtagtttgactcataaacaacaaaaagagattgaagagcaaataaag
cgtggtgccattcagtttttatatgtagctccagagcgctttgaaaatactttttttcta
aatttattacgtaaaatagaaataccccttatcgcttttgatgaagcacactgtatatcg
aagtggggacatgattttagacctagttaccaaagtgtcatacaaaaagtttttacatta
cctcaaaacttcacaatagttgcacttacagctacggcaactgctgaagttcaacaagat
atcatgtctaagttatcaattggacaaaatgatgttgtcaaaacaagtactaaaagacgc
aatttaatcttcaaagtcaatccgacttatcagcgacaaaaatttgttgtggattatgtt
gcaaatcatgaaggacaggcaggaatcatttattgttccactcgtaagcaggtagaagaa
ttacacgaagctctaaatagtgaaaaaattaagagcacaatttatcatgctggtttaacg
aataaagagagaattgaggcgcaaagtgatttcttgtatgatcgtgtagagattgtcatt
gcgacaaatgcatttggtatgggtattgataaatcaaatgtacgttatgtcattcactat
aacatgcctggagatttggaatcttactatcaggaagctggacgcgcgggacgtgatggt
ttaaaaagtgagtgtatccttttgtttagtgaacgagataagggattacatgagtatttt
attactgtatcccaagctgatgatgactataaagataaaatgggcgaaaaattaacgaaa
atgattcaatataccaaaacgaaaaagtgtttagaagcgacaattgttcattattttgaa
cccaatgaaaatttagaggaatgtaatcaatgtagtaattgtatacaggaaaataaaacg
tatgatatgactcgtgaagcgaaaatgattattagctgtattgctcgaatgaagcaacag
gaaaattatagtgttattatacaagttttacgtggagaagtgacagattatataaaacac
tatcattataatgaattaacgacacatgggttgatgaaaaattatacaacatctgagtta
tcacacttaattgatgagctacgtttcaaaggatatttaaatgaaaatgatgaaattctt
atgtgtgatacttcagtgaaacaattactaaataattataccaaggtttataccactccg
ttcaaacaaaaaactaaagagaaggtatttatcaacactgttgaaggtgtggatagagcg
ttatatcgtgagcttgttgatgtacgtaaacagctaagtgataaacttggaatagcacct
gtaagtatattttctgattacacgctcgaagaatttgctaagcgtaaacctgaatcgaaa
caagaaatgattgctattgatggtgtaggtagttataaattaaagcattattgtcctaag
tttatcgaaaccatacaaagctataaaactagaatataa
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