Staphylococcus epidermidis SEI: DP17_202
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Entry
DP17_202 CDS
T03343
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
seps
Staphylococcus epidermidis SEI
Brite
KEGG Orthology (KO) [BR:
seps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seps03019
]
DP17_202
03009 Ribosome biogenesis [BR:
seps03009
]
DP17_202
Enzymes [BR:
seps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DP17_202
Messenger RNA biogenesis [BR:
seps03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DP17_202
Ribosome biogenesis [BR:
seps03009
]
Prokaryotic type
rRNA helicases
DP17_202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AIR82618
LinkDB
All DBs
Position
complement(228258..229604)
Genome browser
AA seq
448 aa
AA seq
DB search
MSKHPFEHFNLDENLIEAVKNLNFEKPTEIQNRIIPRILKGTNLIGQSQTGTGKSHAFLL
PLIQLIESDIQEPQAIVVAPTRELAQQLYQVAMHLVKFKKGINVKLFIGGTDLEKDKQRC
SHQPQLIIGTPTRINDLAHSGYLHAHLASYLIIDEADLMIDLGLIEDVDHIAARLDDENA
HLAVFSATIPKSLQPFLNKYLSQPEFVEVDGKAHNKENIEFYLIPTKGSAKVDKTLELID
ILNPYLCIIFCNSRENADELADTLNKEGIKIGMIHGGLTPRERKQQMKRIRNLDFQFVIA
SDLASRGIDIEGVSHVINFDVPNDIDFFTHRVGRTGRGNYKGVAITLYSPDEESNITLIE
DRGYKFENVDIKNGELKPIKAYNMRKSRQSKDDHLTNEVKHKVRSKSKRKVKPGYKKKFK
QEVEKMKRQERKQYSKKQNRQKRKNNKG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacatccatttgaacactttaatttagatgagaatttaattgaagctgttaaa
aatctcaattttgaaaaaccgactgaaatccaaaatagaatcataccgagaattcttaaa
ggaacaaatttaataggacaatctcaaactggaactggaaagtcacacgcttttctttta
ccattaattcaacttatagaaagtgacattcaagagccacaagccatcgtagtagctcca
acacgtgaacttgctcagcaactatatcaagttgctatgcatttagtaaaattcaaaaaa
ggtataaatgtaaaacttttcattggtggtaccgatttagaaaaagataaacaacgatgt
agccatcaaccacaactcattattggtacaccaacaagaattaatgatttagcacattca
ggttatcttcatgcacatttagcgtcatatttaattatagatgaagctgatttaatgatt
gacctcggtctcattgaagatgttgaccatattgcagcgagattagatgatgaaaatgct
catctagcggtatttagtgcaacaatacctaaatcattacaaccatttttaaataaatat
ttaagtcaaccagaatttgtagaagttgatggcaaagctcataataaagaaaatatcgaa
ttttatctaattcctacaaaaggttctgctaaggtagataaaacattggaattgatagat
atattgaatccttatctatgtattattttctgtaacagtcgtgaaaatgccgatgaattg
gcagacactttaaataaagaaggaattaaaataggtatgattcatggtggtttaacacca
agagaacgtaaacaacaaatgaaaagaataagaaatttagattttcaatttgtcattgca
agcgatcttgcttctagaggaatagatattgaaggcgtaagtcatgttattaatttcgat
gtacccaatgatatcgatttcttcacacatcgcgtaggtcgaacaggaagaggtaattat
aaaggtgtagccattacattatatagtcctgatgaagaaagtaatattactcttattgaa
gacagaggttataaatttgaaaatgtagatattaagaatggtgaattaaaaccgataaag
gcatacaatatgcgtaaatcaagacagagcaaagatgaccatttaacaaatgaagttaaa
cacaaagtaagaagtaaatcaaaacgtaaagttaaaccaggctataaaaagaagtttaaa
caagaagttgaaaaaatgaaacgtcaagaaagaaagcagtatagtaaaaagcaaaataga
caaaaacgaaaaaataataaaggatag
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